RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 GUCY1B2O75343 617 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 DCTN3O75935 186 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 SCELO95171 688 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 KCNK5O95279 499 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 ETHE1O95571 254 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 SMIM10L1P0DMW3 83 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 FGF5P12034 268 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 IDO1P14902 403 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 TIA1P31483 386 aaKnown RBP eCLIP12.6□□□□□ -0.391e-10■■■□□ 19.1
SNX12-205ENST00000490561 ATP4BP51164 291 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 MTTPP55157 894 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 STX1BP61266 288 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 TRA2BP62995 288 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 FOXM1Q08050 763 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 RSPO4Q2I0M5 234 aaPredicted RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 HKDC1Q2TB90 917 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNX12-205ENST00000490561 OR4C11Q6IEV9 310 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 COMMD6Q7Z4G1 85 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 ZCCHC7Q8N3Z6 543 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 RNF175Q8N4F7 328 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 C1orf52Q8N6N3 182 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 UTP15Q8TED0 518 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 APIPQ96GX9 242 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 SMIM10Q96HG1 83 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 TEFMQ96QE5 360 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 OR6C1Q96RD1 312 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 OR52B2Q96RD2 323 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 ANKHQ9HCJ1 492 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 LYARQ9NX58 379 aaKnown RBP12.6□□□□□ -0.39
SNX12-205ENST00000490561 CDC14AQ9UNH5 594 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 LOXL2Q9Y4K0 774 aa12.6□□□□□ -0.39
SNX12-205ENST00000490561 PLPP1O14494 284 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 HCRTR1O43613 425 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 B3GALT2O43825 422 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 PCDH7O60245 1069 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 ZNF888P0CJ79 500 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 DDX5P17844 614 aaKnown RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 BSGP35613 385 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 ASMTP46597 345 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 AVPR1BP47901 424 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 MRPL19P49406 292 aaKnown RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 PLA2G16P53816 162 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 CYP20A1Q6UW02 462 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 RAB11FIP2Q7L804 512 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 WDR36Q8NI36 951 aaKnown RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 ZCCHC10Q8TBK6 192 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 ADAMTS18Q8TE60 1221 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 ADAMTS14Q8WXS8 1223 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 STARD8Q92502 1023 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 C11orf24Q96F05 449 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 C17orf62Q9BQA9 187 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 NPLQ9BXD5 320 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 SPRTNQ9H040 489 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 KLHL31Q9H511 634 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 DDX31Q9H8H2 851 aaKnown RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 SYNPO2LQ9H987 977 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 SPACA6W5XKT8 324 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 UNC13CQ8NB66 2214 aa12.59□□□□□ -0.39
SNX12-205ENST00000490561 SNRNP200O75643 2136 aaKnown RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 EP300Q09472 2414 aaPredicted RBP12.59□□□□□ -0.39
SNX12-205ENST00000490561 GNG14A0A1W2PPG7 69 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 E9PBE3 544 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 H0YIG0 161 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 H3BMH7 237 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 DSCR3O14972 297 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 SLC22A2O15244 555 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 KLHL41O60662 606 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 PRMT3O60678 531 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 GALR3O60755 368 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 SH3BGRLO75368 114 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 NSA2O95478 260 aaKnown RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 STATHP02808 62 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 ANXA4P09525 319 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 JMJD7P0C870 316 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 HIST1H1TP22492 207 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 ADSLP30566 484 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 RPL3P39023 403 aaKnown RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 PLA2G5P39877 138 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms