RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TMEM200CA6NKL6 621 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 CHST10O43529 356 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 KLHL41O60662 606 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 STSP08842 583 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 COL8A1P27658 744 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 PPP2R1BP30154 601 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 GLRBP48167 497 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 GPR143P51810 404 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 POU4F1Q01851 419 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 CDC16Q13042 620 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 TUBA3CQ13748 450 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 ABRAXAS2Q15018 415 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 HERC3Q15034 1050 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 KBTBD12Q3ZCT8 623 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 MINDY4Q4G0A6 757 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 SFT2D3Q587I9 215 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 TUBA3EQ6PEY2 450 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 UBE3DQ7Z6J8 389 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 NKAPQ8N5F7 415 aaKnown RBP11.09□□□□□ -0.63
SRSF4-204ENST00000489898 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 ATL1Q8WXF7 558 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 MS4A6EQ96DS6 147 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 CSF3RQ99062 836 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 FAM129AQ9BZQ8 928 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 ANKHQ9HCJ1 492 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 GPAMQ9HCL2 828 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 IGSF5Q9NSI5 407 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 PTBP2Q9UKA9 531 aaKnown RBP11.09□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF490Q9ULM2 529 aaPredicted RBP11.09□□□□□ -0.63
SRSF4-204ENST00000489898 PPIEQ9UNP9 301 aaKnown RBP11.09□□□□□ -0.63
SRSF4-204ENST00000489898 DNAJC13O75165 2243 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 FREM3P0C091 2139 aa11.09□□□□□ -0.63
SRSF4-204ENST00000489898 SAGE2PA6NJ88 616 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 FAM227AF5H4B4 570 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 NDC80O14777 642 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 SERPINA6P08185 405 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 MAOAP21397 527 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 SAT1P21673 171 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 GP5P40197 560 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 KCNK10P57789 538 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 RAB8AP61006 207 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 IRF9Q00978 393 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 PCDH1Q08174 1060 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 RUNX2Q13950 521 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
SRSF4-204ENST00000489898 C4orf17Q53FE4 359 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 FAM219BQ5XKK7 198 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 TBC1D20Q96BZ9 403 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 FRMD6Q96NE9 622 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 GPR78Q96P69 363 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 CPNE1Q99829 537 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 ZNF717Q9BY31 904 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-204ENST00000489898 FUT8Q9BYC5 575 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 KIAA1549Q9HCM3 1950 aa11.08□□□□□ -0.64
SRSF4-204ENST00000489898 TRAV17A0A0B4J275 112 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 A0A0G2JN53 185 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 LRIT2A6NDA9 550 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 NCF1BA6NI72 391 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 NCF1CA8MVU1 366 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 CYR61O00622 381 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 PRKNO60260 465 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 WDR47O94967 919 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 SCELO95171 688 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HIST1H2AGP0C0S8 130 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 CCDC166P0CW27 439 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 NCF1P14598 390 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HIST1H2ADP20671 130 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 MAGEA12P43365 314 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HSPA7P48741 367 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 AGTR2P50052 363 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HNMTP50135 292 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ARG2P78540 354 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ZNF33BQ06732 778 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 BTBD16Q32M84 506 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 RNFT1Q5M7Z0 435 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 CDKL4Q5MAI5 379 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ACER2Q5QJU3 275 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 SYT10Q6XYQ8 523 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 FGD2Q7Z6J4 655 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ISCA2Q86U28 154 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 OR1N1Q8NGS0 311 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 M1APQ8TC57 530 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 GAL3ST3Q96A11 431 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ISL2Q96A47 359 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 KIAA1191Q96A73 305 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HIST1H2AHQ96KK5 128 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 HIST1H2AJQ99878 128 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 H2AFJQ9BTM1 129 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 EHD1Q9H4M9 534 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 NT5DC2Q9H857 520 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-204ENST00000489898 OLAHQ9NV23 265 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 NSMCE4AQ9NXX6 385 aa11.07□□□□□ -0.64
SRSF4-204ENST00000489898 ABI3Q9P2A4 366 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms