RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 CYP4Z2PQ8N1L4 340 aa10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 OR52N2Q8NGI0 321 aa10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 ZNF669Q96BR6 464 aaPredicted RBP10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 BAG1Q99933 345 aaPredicted RBP10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 DEFB126Q9BYW3 111 aa10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 DEFB127Q9H1M4 99 aa10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 PDE10AQ9Y233 779 aa10.09□□□□□ -0.79
PTP4A2-206ENST00000489313 TRBV11-1A0A0K0K1C0 115 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 CDK2AP1O14519 115 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 OR1F1O43749 312 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 CEP104O60308 925 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 ALOX12P18054 663 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 SLC1A2P43004 574 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 VPS41P49754 854 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 NUP107P57740 925 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 CDK16Q00536 496 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 TRIP13Q15645 432 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 SKOR2Q2VWA4 1001 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 CES4AQ5XG92 561 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 ARHGAP11AQ6P4F7 1023 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 CAND1Q86VP6 1230 aaKnown RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 TMEM139Q8IV31 216 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 ZFP62Q8NB50 900 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 NFAM1Q8NET5 270 aaPredicted RBP10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 C16orf52Q8NHV5 167 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 EEF1AKMT1Q8WVE0 214 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 SGPP1Q9BX95 441 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 FAM129AQ9BZQ8 928 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 RHBGQ9H310 441 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 NECTIN3Q9NQS3 549 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 SAMD15Q9P1V8 674 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 KCNN3Q9UGI6 736 aa10.08□□□□□ -0.8
PTP4A2-206ENST00000489313 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 TCRBV16S1A1N1A0A5B0 115 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 CTAGE15A4D2H0 777 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 HAUS5O94927 633 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 ZWINTO95229 277 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 NPPBP16860 134 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 HNF4AP41235 474 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 CCR8P51685 355 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 RAB8AP61006 207 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 ANKRD22Q5VYY1 191 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 DRICH1Q6PGQ1 229 aaPredicted RBP10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 QSOX2Q6ZRP7 698 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 CTAGE6Q86UF2 777 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 MMP21Q8N119 569 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 ARMC10Q8N2F6 343 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 TMEM156Q8N614 296 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 OR5M3Q8NGP4 307 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 PYCR2Q96C36 320 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 SPNS1Q9H2V7 528 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 CCM2LQ9NUG4 571 aaPredicted RBP10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 FBXW2Q9UKT8 454 aa10.07□□□□□ -0.8
PTP4A2-206ENST00000489313 IGKV3D-11A0A0A0MRZ8 115 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 ZCWPW2A0A1B0GU75 182 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 FAM237BA0A1B0GVD1 139 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PINLYPA6NC86 204 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 FAM166BA8MTA8 275 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 NPIPA2E9PIF3 369 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 NPIPA3F8WFD2 350 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 ITGA10O75578 1167 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 MYO1DO94832 1006 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 KLK2P20151 261 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 SKP1P63208 163 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PWP1Q13610 501 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PHKG1Q16816 387 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 LCTLQ6UWM7 567 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 C16orf47Q6ZP98 133 aaPredicted RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 TGIF2LYQ8IUE0 185 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 TXLNBQ8N3L3 684 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 OR5M9Q8NGP3 310 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 UTP15Q8TED0 518 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 SREK1Q8WXA9 508 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 NDNQ99608 321 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 AARSD1Q9BTE6 412 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 LIME1Q9H400 295 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 PNPLA3Q9NST1 481 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 DEPPQ9NTK1 212 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 C20orf96Q9NUD7 363 aaPredicted RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 DNAJB12Q9NXW2 375 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 KCMF1Q9P0J7 381 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 ZFATQ9P243 1243 aa10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 TRMT6Q9UJA5 497 aaKnown RBP10.06□□□□□ -0.8
PTP4A2-206ENST00000489313 A0A0G2JMM0 328 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 A0A1W2PPB8 328 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 A0A1W2PRS3 328 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 TRBC2A0A5B9 178 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 KIR3DP1A8MWS1 328 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 GOLGA8MH3BSY2 632 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 PSMD12O00232 456 aaPredicted RBP10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 EIF3FO00303 357 aaPredicted RBP10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 SLC16A5O15375 505 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 KLK8O60259 260 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 C8GP07360 202 aa10.05□□□□□ -0.8
PTP4A2-206ENST00000489313 RNH1P13489 461 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms