RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 UBXN8O00124 270 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CHST10O43529 356 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 VPS4BO75351 444 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CLEC3AO75596 197 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 FHP07954 510 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 GFAPP14136 432 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CNTFP26441 200 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 ECHS1P30084 290 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 GLRBP48167 497 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 RAB8AP61006 207 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 SNRPNP63162 240 aaKnown RBP12.74□□□□□ -0.37
LMO4-203ENST00000489303 IRF9Q00978 393 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 ACTN3Q08043 901 aaPredicted RBP12.74□□□□□ -0.37
LMO4-203ENST00000489303 TGM3Q08188 693 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CHIT1Q13231 466 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
LMO4-203ENST00000489303 DOC2AQ14183 400 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CRB2Q5IJ48 1285 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 ISLR2Q6UXK2 745 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CPEB2Q7Z5Q1 589 aaKnown RBP12.74□□□□□ -0.37
LMO4-203ENST00000489303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.74□□□□□ -0.37
LMO4-203ENST00000489303 IQCKQ8N0W5 287 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 CREB3L4Q8TEY5 395 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 TBC1D20Q96BZ9 403 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 C19orf60Q96EN9 201 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 LMF1Q96S06 567 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 ATOH8Q96SQ7 321 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 PAFAH2Q99487 392 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 WDR77Q9BQA1 342 aaPredicted RBP12.74□□□□□ -0.37
LMO4-203ENST00000489303 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 RBCK1Q9BYM8 510 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 VPS4AQ9UN37 437 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 ANKRD12Q6UB98 2062 aa12.74□□□□□ -0.37
LMO4-203ENST00000489303 MDC1Q14676 2089 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 EXOC1LA0A1B0GW35 172 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 HMX2A2RU54 273 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 K7EPI3 171 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 PRR35P0CG20 571 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 RNH1P13489 461 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 EPB42P16452 691 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 GMPRP36959 345 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 KCNC1P48547 511 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 BTN3A2P78410 334 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 MFAP5Q13361 173 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 ABRAXAS2Q15018 415 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 INPP5JQ15735 1006 aaPredicted RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 NSDHLQ15738 373 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 TBCCQ15814 346 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 TRMT10CQ7L0Y3 403 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 CENPLQ8N0S6 344 aaPredicted RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 PLPP5Q8NEB5 264 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 OR5T3Q8NGG3 340 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 UHMK1Q8TAS1 419 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 DNAJB14Q8TBM8 379 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 PPP4R1Q8TF05 950 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 UBTD2Q8WUN7 234 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 GAL3ST3Q96A11 431 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 WDR34Q96EX3 536 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 KLHL31Q9H511 634 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 TEKT2Q9UIF3 430 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
LMO4-203ENST00000489303 TNPO3Q9Y5L0 923 aaKnown RBP12.73□□□□□ -0.37
LMO4-203ENST00000489303 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 DYTNA2CJ06 578 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 MAGEB17A8MXT2 336 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 B4GALT2O60909 372 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 SEC24DO94855 1032 aaPredicted RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 B3GALT4O96024 378 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 ALDOAP04075 364 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 RBP1P09455 135 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 SERPINB1P30740 379 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 OLR1P78380 273 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 Q0VFX4 171 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 HYAL2Q12891 473 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 RCN2Q14257 317 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 EXT1Q16394 746 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 PFKFB4Q16877 469 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 IGFL2Q6UWQ7 119 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 LINC00696Q6ZRV3 163 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 Q6ZS92 163 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 LANCL3Q6ZV70 420 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 ANKRD37Q7Z713 158 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 CNPY4Q8N129 248 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 SRFBP1Q8NEF9 429 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 BRIX1Q8TDN6 353 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms