RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MAGEB17A8MXT2 336 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 ICAM2P13598 275 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 CD22P20273 847 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 ECHS1P30084 290 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 HNRNPH1P31943 449 aaKnown RBP23.52■■□□□ 1.36
HMGN1-217ENST00000489072 AGTR2P50052 363 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 IRF9Q00978 393 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 NSDHLQ15738 373 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 PDK4Q16654 411 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 PLAG1Q6DJT9 500 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 ADNP2Q6IQ32 1131 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 VN1R5Q7Z5H4 357 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 RELL1Q8IUW5 271 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 CENPLQ8N0S6 344 aaPredicted RBP23.52■■□□□ 1.36
HMGN1-217ENST00000489072 KRT78Q8N1N4 520 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 MNS1Q8NEH6 495 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 KCTD4Q8WVF5 259 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 BARD1Q99728 777 aaKnown RBP23.52■■□□□ 1.36
HMGN1-217ENST00000489072 SLC29A3Q9BZD2 475 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 EHD1Q9H4M9 534 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 ACSS3Q9H6R3 686 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 NT5DC2Q9H857 520 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 NUDT4Q9NZJ9 180 aa23.52■■□□□ 1.36
HMGN1-217ENST00000489072 MTRF1LQ9UGC7 380 aaKnown RBP23.52■■□□□ 1.36
HMGN1-217ENST00000489072 UBXN8O00124 270 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CLGNO14967 610 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CCNT2O60583 730 aaKnown RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 B4GALT2O60909 372 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 KERAO60938 352 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 TBX6O95947 436 aaPredicted RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 S100BP04271 92 aaPredicted RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CTAGE8P0CG41 777 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 TSFMP43897 325 aaKnown RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 DOC2AQ14183 400 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 TLR1Q15399 786 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 NR6A1Q15406 480 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 UAP1Q16222 522 aaPredicted RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 BTBD16Q32M84 506 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 SFT2D3Q587I9 215 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CTAGE4Q8IX94 777 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 TTLQ8NG68 377 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 IFT81Q8WYA0 676 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 WDR34Q96EX3 536 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CD244Q9BZW8 370 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CDC42EP4Q9H3Q1 356 aaKnown RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 CLK4Q9HAZ1 481 aaKnown RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 SNX15Q9NRS6 342 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 ZNF490Q9ULM2 529 aaPredicted RBP23.51■■□□□ 1.35
HMGN1-217ENST00000489072 ACOT9Q9Y305 439 aa23.51■■□□□ 1.35
HMGN1-217ENST00000489072 POLEQ07864 2286 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 SUPT3HB4E1H0 165 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 SUPT3HO75486 399 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 F10P00742 488 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 C2P06681 752 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 PHBP35232 272 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 STXBP1P61764 594 aaKnown RBP23.5■■□□□ 1.35
HMGN1-217ENST00000489072 AP2B1P63010 937 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 ARG2P78540 354 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 XKR6Q5GH73 641 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 PAPD4Q6PIY7 484 aaKnown RBP23.5■■□□□ 1.35
HMGN1-217ENST00000489072 CA13Q8N1Q1 262 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 CCT6BQ92526 530 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 GAL3ST3Q96A11 431 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 MS4A6EQ96DS6 147 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 PTCD3Q96EY7 689 aaKnown RBP23.5■■□□□ 1.35
HMGN1-217ENST00000489072 FUT8Q9BYC5 575 aa23.5■■□□□ 1.35
HMGN1-217ENST00000489072 PITHD1Q9GZP4 211 aaPredicted RBP23.5■■□□□ 1.35
HMGN1-217ENST00000489072 A0A087X1B8 175 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 A0A0G2JN53 185 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 LRIT2A6NDA9 550 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 FAM227AF5H4B4 570 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 CLEC3AO75596 197 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 UQCRHP07919 91 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 RNH1P13489 461 aaKnown RBP23.49■■□□□ 1.35
HMGN1-217ENST00000489072 JAK1P23458 1154 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 BTN3A2P78410 334 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 BTG2P78543 158 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 CEP128Q6ZU80 1094 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 LRRC70Q7Z2Q7 622 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 UBTD2Q8WUN7 234 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 HAS2Q92819 552 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 FMO2Q99518 471 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 RHBGQ9H310 441 aa23.49■■□□□ 1.35
HMGN1-217ENST00000489072 DYTNA2CJ06 578 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ERI3O43414 337 aaKnown RBP23.48■■□□□ 1.35
HMGN1-217ENST00000489072 CBX6O95503 412 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ACSL3O95573 720 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 WDPCPO95876 746 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ALDOAP04075 364 aaKnown RBP23.48■■□□□ 1.35
HMGN1-217ENST00000489072 TUBB4AP04350 444 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 MTHFD2P13995 350 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 GSTM2P28161 218 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 TNFSF10P50591 281 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 OR4D2P58180 307 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 EIF2S3LQ2VIR3 472 aaKnown RBP23.48■■□□□ 1.35
HMGN1-217ENST00000489072 ADPRMQ3LIE5 342 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 GLE1Q53GS7 698 aaKnown RBP23.48■■□□□ 1.35
HMGN1-217ENST00000489072 QSOX2Q6ZRP7 698 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 OR1N1Q8NGS0 311 aa23.48■■□□□ 1.35
HMGN1-217ENST00000489072 SEC16BQ96JE7 1060 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms