RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CDKL1Q00532 357 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 OC90Q02509 493 aaPredicted RBP23.03■■□□□ 1.28
LIME1-206ENST00000487026 NIPAL1Q6NVV3 410 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 FRA10AC1Q70Z53 315 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 SLC5A8Q8N695 610 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 ELP5Q8TE02 316 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 VPS39Q96JC1 886 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 MCMBPQ9BTE3 642 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 RHOJQ9H4E5 214 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 CAB39LQ9H9S4 337 aa23.03■■□□□ 1.28
LIME1-206ENST00000487026 URADA6NGE7 173 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 SSTR1P30872 391 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 TAS2R50P59544 299 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 ZNF468Q5VIY5 522 aaPredicted RBP23.02■■□□□ 1.28
LIME1-206ENST00000487026 RPS19BP1Q86WX3 136 aaKnown RBP23.02■■□□□ 1.28
LIME1-206ENST00000487026 CA13Q8N1Q1 262 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 RHBDF1Q96CC6 855 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 TSPAN10Q9H1Z9 355 aaPredicted RBP23.02■■□□□ 1.28
LIME1-206ENST00000487026 DPH5Q9H2P9 285 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 NECTIN3Q9NQS3 549 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 COPG2Q9UBF2 871 aa23.02■■□□□ 1.28
LIME1-206ENST00000487026 A0A0G2JN53 185 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 CXorf49A8MYA2 514 aaPredicted RBP23.01■■□□□ 1.27
LIME1-206ENST00000487026 PSMD12O00232 456 aaPredicted RBP23.01■■□□□ 1.27
LIME1-206ENST00000487026 CCL21O00585 134 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 SERPINA6P08185 405 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 C1GALT1C1LP0DN25 315 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 RNH1P13489 461 aaKnown RBP23.01■■□□□ 1.27
LIME1-206ENST00000487026 SLC6A12P48065 614 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 HNMTP50135 292 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 SLC12A2P55011 1212 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 BTN3A2P78410 334 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 FBXO48Q5FWF7 155 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 SP5Q6BEB4 398 aaPredicted RBP23.01■■□□□ 1.27
LIME1-206ENST00000487026 SLCO4C1Q6ZQN7 724 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 QSOX2Q6ZRP7 698 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 ADAMTSL2Q86TH1 951 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 PYROXD1Q8WU10 500 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 SAYSD1Q9NPB0 183 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 NSMCE4AQ9NXX6 385 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 PCDHGB6Q9Y5F9 930 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 MYO9AB2RTY4 2548 aa23.01■■□□□ 1.27
LIME1-206ENST00000487026 ARHGAP10A1A4S6 786 aa23■■□□□ 1.27
LIME1-206ENST00000487026 H2AFYO75367 372 aaKnown RBP23■■□□□ 1.27
LIME1-206ENST00000487026 CD46P15529 392 aa23■■□□□ 1.27
LIME1-206ENST00000487026 GNAZP19086 355 aa23■■□□□ 1.27
LIME1-206ENST00000487026 EEF1DP29692 281 aaKnown RBP23■■□□□ 1.27
LIME1-206ENST00000487026 SLBPQ14493 270 aaKnown RBP eCLIP23■■□□□ 1.27
LIME1-206ENST00000487026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23■■□□□ 1.27
LIME1-206ENST00000487026 CCT6BQ92526 530 aa23■■□□□ 1.27
LIME1-206ENST00000487026 SCMH1Q96GD3 660 aa23■■□□□ 1.27
LIME1-206ENST00000487026 CLK4Q9HAZ1 481 aaKnown RBP23■■□□□ 1.27
LIME1-206ENST00000487026 PRDM9Q9NQV7 894 aa23■■□□□ 1.27
LIME1-206ENST00000487026 CREBBPQ92793 2442 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 TCRBV16S1A1N1A0A5B0 115 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 PRSS44E7EML9 344 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 TAPBPO15533 448 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 PHGDHO43175 533 aaKnown RBP22.99■■□□□ 1.27
LIME1-206ENST00000487026 NEURL1O76050 574 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 SP1P08047 785 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 TPP2P29144 1249 aaPredicted RBP22.99■■□□□ 1.27
LIME1-206ENST00000487026 CA7P43166 264 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 RUNX2Q13950 521 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 TGFBIQ15582 683 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 GALNTL5Q7Z4T8 443 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.99■■□□□ 1.27
LIME1-206ENST00000487026 NFAM1Q8NET5 270 aaPredicted RBP22.99■■□□□ 1.27
LIME1-206ENST00000487026 ESAMQ96AP7 390 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 CCDC120Q96HB5 630 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 DERL2Q9GZP9 239 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 POPDC3Q9HBV1 291 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 LRFN1Q9P244 771 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 RNF14Q9UBS8 474 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 LRBAP50851 2863 aa22.99■■□□□ 1.27
LIME1-206ENST00000487026 IGKV3D-11A0A0A0MRZ8 115 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 WISP3O95389 354 aaPredicted RBP22.98■■□□□ 1.27
LIME1-206ENST00000487026 CCDC166P0CW27 439 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 HNRNPH1P31943 449 aaKnown RBP22.98■■□□□ 1.27
LIME1-206ENST00000487026 POU4F1Q01851 419 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 ALDH6A1Q02252 535 aaKnown RBP22.98■■□□□ 1.27
LIME1-206ENST00000487026 RBPJQ06330 500 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 CBLBQ13191 982 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 SLC25A25Q6KCM7 469 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 TMIGD1Q6UXZ0 262 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 KLHDC8AQ8IYD2 350 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 BBOF1Q8ND07 529 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 ITLN2Q8WWU7 325 aaPredicted RBP22.98■■□□□ 1.27
LIME1-206ENST00000487026 FAR2Q96K12 515 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 ERP44Q9BS26 406 aa22.98■■□□□ 1.27
LIME1-206ENST00000487026 SUCOQ9UBS9 1254 aaKnown RBP22.98■■□□□ 1.27
LIME1-206ENST00000487026 SAGE2PA6NJ88 616 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 NPIPA5E9PKD4 350 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 ZNHIT1O43257 154 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 SLC19A2O60779 497 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 MLF1P58340 268 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 STXBP1P61764 594 aaKnown RBP22.97■■□□□ 1.27
LIME1-206ENST00000487026 MAPKAPK3Q16644 382 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 SLC34A3Q8N130 599 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 LGI4Q8N135 537 aa22.97■■□□□ 1.27
LIME1-206ENST00000487026 HORMAD2Q8N7B1 307 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms