RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LCP2Q13094 533 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 NCF4Q15080 339 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 INPP5JQ15735 1006 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 PFKFB4Q16877 469 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 PLEKHN1Q494U1 663 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 SLC6A19Q695T7 634 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 JMJD6Q6NYC1 403 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 SPESP1Q6UW49 350 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 NEK10Q6ZWH5 1172 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 ATCAYQ86WG3 371 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 TEX9Q8N6V9 391 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 C19orf47Q8N9M1 422 aaKnown RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 MAGEC3Q8TD91 643 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 EEF1AKMT1Q8WVE0 214 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 ELMO1Q92556 727 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 PHF21BQ96EK2 531 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 LRFN5Q96NI6 719 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 IL17FQ96PD4 163 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 MVB12BQ9H7P6 319 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 SLC22A11Q9NSA0 550 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 NDE1Q9NXR1 346 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 VPS4AQ9UN37 437 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 ASF1AQ9Y294 204 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 TRAF6Q9Y4K3 522 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 CSAG2Q9Y5P2 127 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 HEBP2Q9Y5Z4 205 aa8.97□□□□□ -0.97
TMEM39A-208ENST00000486159 UTP20O75691 2785 aaKnown RBP8.96□□□□□ -0.97
TMEM39A-208ENST00000486159 UBXN8O00124 270 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC16A5O15375 505 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MED26O95402 600 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CHEK2O96017 543 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 FTH1P02794 183 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 UMODP07911 640 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MPC1LP0DKB6 136 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PCSK2P16519 638 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 NCF2P19878 526 aaPredicted RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CCR7P32248 378 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 GRIA3P42263 894 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PIK3CGP48736 1102 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 ATP4BP51164 291 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 KCNJ2P63252 427 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 YBX1P67809 324 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CDKL1Q00532 357 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CLCQ05315 142 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 GRB7Q14451 532 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PCBP2Q15366 365 aaKnown RBP eCLIP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MAPRE2Q15555 327 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 TSNQ15631 228 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 LSM12Q3MHD2 195 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CCSMST1Q4G0I0 132 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 WASHC2DQ5SRD0 308 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 SULT1C3Q6IMI6 304 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 FRA10AC1Q70Z53 315 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CPNE9Q8IYJ1 553 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 TCAIMQ8N3R3 496 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 DNAJC22Q8N4W6 341 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 LINC01555Q8NAE3 123 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PDPRQ8NCN5 879 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 OR8K5Q8NH50 307 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 GIMAP7Q8NHV1 300 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 RP9Q8TA86 221 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 ZNF483Q8TF39 744 aaPredicted RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 UBTD2Q8WUN7 234 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MCUR1Q96AQ8 359 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 GBP5Q96PP8 586 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MENTQ9BUN1 341 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 TRIM54Q9BYV2 358 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC7A5P2Q9GIP4 190 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 TMEM45AQ9NWC5 275 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 TAS2R1Q9NYW7 299 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 CD274Q9NZQ7 290 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 STOX2Q9P2F5 926 aaPredicted RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 MAP10Q9P2G4 905 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 SERTAD3Q9UJW9 196 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PTRH2Q9Y3E5 179 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 OARD1Q9Y530 152 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 PCDHGA9Q9Y5G4 932 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 NBASA2RRP1 2371 aa8.96□□□□□ -0.98
TMEM39A-208ENST00000486159 NPEPPSL1A6NEC2 478 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ISM1B1AKI9 464 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 B2RBV5 119 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 CDC7O00311 574 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SDHDO14521 159 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 AZIN1O14977 448 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 GSC2O15499 205 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 OR2B3O76000 313 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 AGFG2O95081 481 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ESRRBO95718 433 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 ENO1P06733 434 aaKnown RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 C8GP07360 202 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 KRT16P08779 473 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 EEF1DP29692 281 aaKnown RBP8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 KLF10Q13118 480 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SP140Q13342 867 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 GBX1Q14549 363 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 NAA25Q14CX7 972 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 TGFBIQ15582 683 aa8.95□□□□□ -0.98
TMEM39A-208ENST00000486159 SLC9B1Q4ZJI4 515 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms