RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SSPNQ14714 243 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 GRM7Q14831 915 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 FAM214AQ32MH5 1076 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 PRAMEF17Q5VTA0 474 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 FIGLAQ6QHK4 219 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 MED25Q71SY5 747 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 RAB43Q86YS6 212 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 PPFIBP2Q8ND30 876 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 OR4F6Q8NGB9 312 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 OR52B6Q8NGF0 335 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 AGR3Q8TD06 166 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 ZNF285Q96NJ3 590 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 IL17FQ96PD4 163 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 GBP5Q96PP8 586 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 TMEM120AQ9BXJ8 343 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 SLC29A3Q9BZD2 475 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 KCNK13Q9HB14 408 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 PFDN4Q9NQP4 134 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 CIDEBQ9UHD4 219 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 GPN3Q9UHW5 284 aaPredicted RBP16.22■□□□□ 0.19
VIM-205ENST00000485947 DCTN4Q9UJW0 460 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 ZNF225Q9UK10 706 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 G3BP2Q9UN86 482 aaKnown RBP16.22■□□□□ 0.19
VIM-205ENST00000485947 DYRK1BQ9Y463 629 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 PCM1Q15154 2024 aa16.22■□□□□ 0.19
VIM-205ENST00000485947 A0A0G2JND7 137 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 PPP6CO00743 305 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 ZNF195O14628 629 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 KLHL41O60662 606 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 WISP1O95388 367 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 CLDN9O95484 217 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 ALBP02768 609 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 GNAZP19086 355 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 EPORP19235 508 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 ARL1P40616 181 aaPredicted RBP16.21■□□□□ 0.19
VIM-205ENST00000485947 CASRP41180 1078 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 GCGRP47871 477 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 KLRB1Q12918 225 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 IL10RAQ13651 578 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 E2F2Q14209 437 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 PRAMEF13Q5VWM6 474 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 LIPJQ5W064 366 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 RNF165Q6ZSG1 346 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 L3MBTL4Q8NA19 623 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 OR2L3Q8NG85 312 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 OR2A1Q8NGT9 310 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 FKBP10Q96AY3 582 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 THOC1Q96FV9 657 aaKnown RBP16.21■□□□□ 0.19
VIM-205ENST00000485947 CCT7Q99832 543 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 SPRTNQ9H040 489 aaPredicted RBP16.21■□□□□ 0.19
VIM-205ENST00000485947 EHD1Q9H4M9 534 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 ACTR8Q9H981 624 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 TNFRSF12AQ9NP84 129 aa16.21■□□□□ 0.19
VIM-205ENST00000485947 A0A1B0GX78 115 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 FITM1A5D6W6 292 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 CCNDBP1O95273 360 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 CMPK1P30085 196 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 HMOX2P30519 316 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 GRIA3P42263 894 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 CASP2P42575 452 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 EMP3P54852 163 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 RPS18P62269 152 aaKnown RBP16.2■□□□□ 0.18
VIM-205ENST00000485947 FASTKQ14296 549 aaKnown RBP16.2■□□□□ 0.18
VIM-205ENST00000485947 TBCCQ15814 346 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 NKAIN1Q4KMZ8 207 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 THEMIS2Q5TEJ8 643 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 FCRL6Q6DN72 434 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 LCN10Q6JVE6 187 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 LETMD1Q6P1Q0 360 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 EPGNQ6UW88 154 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 ZNF655Q8N720 491 aaPredicted RBP16.2■□□□□ 0.18
VIM-205ENST00000485947 RNF31Q96EP0 1072 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 OR4K3Q96R72 315 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 ING2Q9H160 280 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 IRAK4Q9NWZ3 460 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 IFT80Q9P2H3 777 aaPredicted RBP16.2■□□□□ 0.18
VIM-205ENST00000485947 NDOR1Q9UHB4 597 aa16.2■□□□□ 0.18
VIM-205ENST00000485947 SPTBP11277 2137 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 A0A1B0GTL3 188 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 TMEM233B4DJY2 109 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 HCRTR1O43613 425 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 KLF7O75840 302 aaPredicted RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 CEACAM4O75871 244 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 NPPBP16860 134 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 HNF4AP41235 474 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 ABATP80404 500 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 IRF8Q02556 426 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 ZNF33BQ06732 778 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 CHIT1Q13231 466 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 TSTA3Q13630 321 aaPredicted RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 PDCD2Q16342 344 aaPredicted RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 DEFB110Q30KQ9 67 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 CLEC6AQ6EIG7 209 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 MRPL14Q6P1L8 145 aaKnown RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 MAVSQ7Z434 540 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 CDYL2Q8N8U2 506 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 TTC29Q8NA56 475 aaPredicted RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 OR2Y1Q8NGV0 311 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms