RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ATP13A2Q9NQ11 1180 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 TMEM216Q9P0N5 145 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 COPG2Q9UBF2 871 aa15.33■□□□□ 0.04
DDR1-246ENST00000485023 BOD1L1Q8NFC6 3051 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 FLNBO75369 2602 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 LRIT2A6NDA9 550 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 PYCARD-AS1I3L0S3 204 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 E2F3O00716 465 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 B4GALT2O60909 372 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 CLEC3AO75596 197 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 CEACAM4O75871 244 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 WFS1O76024 890 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 TBX6O95947 436 aaPredicted RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 SBK3P0C264 359 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 C8orf89P0DMQ9 161 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 COX6A1P12074 109 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 PIK3CGP48736 1102 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 TBCCQ15814 346 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 GRHL2Q6ISB3 625 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 ZNF605Q86T29 641 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 CYP4X1Q8N118 509 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 METTL21AQ8WXB1 218 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.32■□□□□ 0.04
DDR1-246ENST00000485023 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 F2RL3Q96RI0 385 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 TRIM4Q9C037 500 aa15.32■□□□□ 0.04
DDR1-246ENST00000485023 PITHD1Q9GZP4 211 aaPredicted RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 REXO4Q9GZR2 422 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 NOL11Q9H8H0 719 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 PCDHGA9Q9Y5G4 932 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 TNPO3Q9Y5L0 923 aaKnown RBP15.32■□□□□ 0.04
DDR1-246ENST00000485023 NSG1A0A0A6YYJ2 146 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 A8MT66 165 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 SAP18O00422 153 aaKnown RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 SEC24DO94855 1032 aaPredicted RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 FHP07954 510 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 CELA2AP08217 269 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 SMIM10L1P0DMW3 83 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 KRT15P19012 456 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 TSPAN8P19075 237 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 CERS1P27544 350 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 GSTM2P28161 218 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 Q0VFX4 171 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 AIMP2Q13155 320 aaKnown RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 TRIM40Q6P9F5 258 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 CA13Q8N1Q1 262 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 OR2L5Q8NG80 312 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 OR7G3Q8NG95 312 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 OR52B6Q8NGF0 335 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 AENQ8WTP8 325 aaKnown RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 TSLPQ969D9 159 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 ATP6V1E2Q96A05 226 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 NACC2Q96BF6 587 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 TBC1D20Q96BZ9 403 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 SMIM10Q96HG1 83 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 THOC3Q96J01 351 aaKnown RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 VPS50Q96JG6 964 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 MFRPQ9BY79 579 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 COPS7BQ9H9Q2 264 aaPredicted RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 SEMA4BQ9NPR2 832 aaPredicted RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 LANCL2Q9NS86 450 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 PCTPQ9UKL6 214 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 RNF11Q9Y3C5 154 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 GCN1Q92616 2671 aaKnown RBP15.31■□□□□ 0.04
DDR1-246ENST00000485023 CFAP46Q8IYW2 2715 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 SEC16AO15027 2179 aa15.31■□□□□ 0.04
DDR1-246ENST00000485023 IGHV1-45A0A0A0MS14 117 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 TLDC2A0PJX2 215 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 FAM227AF5H4B4 570 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 STX16-NPEPL1H3BU86 382 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 PSMD12O00232 456 aaPredicted RBP15.3■□□□□ 0.04
DDR1-246ENST00000485023 RTCAO00442 366 aaKnown RBP15.3■□□□□ 0.04
DDR1-246ENST00000485023 OR7A17O14581 309 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 STX16O14662 325 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 HPP00738 406 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 TGFB1P01137 390 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 CASP2P42575 452 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 MYBPC3Q14896 1274 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 ABRAXAS2Q15018 415 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 CPSF6Q16630 551 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDR1-246ENST00000485023 NUP210LQ5VU65 1888 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 FAM219BQ5XKK7 198 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 NIPAL1Q6NVV3 410 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 NDUFAF7Q7L592 441 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 LAS2Q8IYD9 372 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 TMEM151AQ8N4L1 468 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 TEX19Q8NA77 164 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 TNRC6AQ8NDV7 1962 aaKnown RBP15.3■□□□□ 0.04
DDR1-246ENST00000485023 ZNF473Q8WTR7 871 aaKnown RBP15.3■□□□□ 0.04
DDR1-246ENST00000485023 UBE2E3Q969T4 207 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 SEC16BQ96JE7 1060 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 MTERF1Q99551 399 aaKnown RBP15.3■□□□□ 0.04
DDR1-246ENST00000485023 MS4A8Q9BY19 250 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 SCN3AQ9NY46 2000 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 LUZP4Q9P127 313 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 BSNQ9UPA5 3926 aa15.3■□□□□ 0.04
DDR1-246ENST00000485023 B3GALT2O43825 422 aa15.29■□□□□ 0.04
DDR1-246ENST00000485023 UQCRHP07919 91 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms