RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 LAS2Q8IYD9 372 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 OR7G3Q8NG95 312 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 OR52B6Q8NGF0 335 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 MS4A6EQ96DS6 147 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 SEC16BQ96JE7 1060 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 IP6K3Q96PC2 410 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 CDK15Q96Q40 435 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 DCDC2Q9UHG0 476 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 RNF11Q9Y3C5 154 aa25.05■■□□□ 1.6
GTF3C4-202ENST00000483873 DLX3O60479 287 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 GLRA3O75311 464 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 ALOX12BO75342 701 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 EMP2P54851 167 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 FAAH2Q6GMR7 532 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 KIRREL2Q6UWL6 708 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 C4orf33Q8N1A6 199 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 ZNF473Q8WTR7 871 aaKnown RBP25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 GAL3ST3Q96A11 431 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 PEX11GQ96HA9 241 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 ADNPQ9H2P0 1102 aa25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 C12orf65Q9H3J6 166 aaKnown RBP25.04■■□□□ 1.6
GTF3C4-202ENST00000483873 OR2W5A6NFC9 320 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 EIF4E1BA6NMX2 242 aaKnown RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 AGPSO00116 658 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 PEX12O00623 359 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 ERI3O43414 337 aaKnown RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 TAC1P20366 129 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 CCL11P51671 97 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 ADPRMQ3LIE5 342 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 LIPJQ5W064 366 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 TMEM102Q8N9M5 508 aaPredicted RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 ZNF483Q8TF39 744 aaPredicted RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 UBE2E3Q969T4 207 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 C8orf44Q96CB5 159 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 ABHD17AQ96GS6 310 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 F2RL3Q96RI0 385 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 MS4A8Q9BY19 250 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 SEMA4BQ9NPR2 832 aaPredicted RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 FBXL4Q9UKA2 621 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 MKL2Q9ULH7 1088 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 FASNP49327 2511 aaKnown RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 CHST10O43529 356 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 SH3BGRLO75368 114 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 C1QL1O75973 258 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 IGHEP01854 428 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 HEXBP07686 556 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 KRT4P19013 534 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 TSPAN8P19075 237 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 CCNG1P51959 295 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 CDH13P55290 713 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 BTN3A2P78410 334 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 TRAF3Q13114 568 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 DDX39BQ13838 428 aaKnown RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 MED25Q71SY5 747 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 ATP6V1E2Q96A05 226 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 TMEM237Q96Q45 408 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 C1QTNF3Q9BXJ4 246 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 VN1R1Q9GZP7 353 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 REXO4Q9GZR2 422 aaKnown RBP25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 PRM3Q9NNZ6 103 aa25.03■■□□□ 1.6
GTF3C4-202ENST00000483873 BAHCC1Q9P281 2608 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 DOCK10Q96BY6 2186 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 A0A1B0GTL3 188 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 PPP6CO00743 305 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 UGDHO60701 494 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 ATP5F1P24539 256 aaPredicted RBP25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 ARL1P40616 181 aaPredicted RBP25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 PLA2G16P53816 162 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 RRADP55042 308 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 SKP1P63208 163 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 CPSF6Q16630 551 aaKnown RBP eCLIP25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 MINDY4Q4G0A6 757 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 DCAF10Q5QP82 559 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 MFSD4BQ5TF39 518 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 FAM219BQ5XKK7 198 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 TRABD2AQ86V40 505 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 L3MBTL4Q8NA19 623 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 OR2L5Q8NG80 312 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 OR11G2Q8NGC1 345 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 NACC2Q96BF6 587 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 TUBD1Q9UJT1 453 aa25.02■■□□□ 1.6
GTF3C4-202ENST00000483873 K7EM74 188 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 COPEO14579 308 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 CDC123O75794 336 aaPredicted RBP25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 CLDN9O95484 217 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 TGFB1P01137 390 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 PROCP04070 461 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 NR1D1P20393 614 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 CRHR1P34998 444 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 HERVK_113P63132 956 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 SLC18A2Q05940 514 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 UNC50Q53HI1 259 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 ZNF678Q5SXM1 525 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 NIPAL1Q6NVV3 410 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 HDXQ7Z353 690 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 HUS1BQ8NHY5 278 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 C9orf43Q8TAL5 461 aaPredicted RBP25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 FER1L6-AS2Q96M78 137 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 QRFPRQ96P65 431 aa25.01■■□□□ 1.59
GTF3C4-202ENST00000483873 ERVK-6Q9BXR3 956 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms