RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ENO2P09104 434 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 TCP1P17987 556 aaKnown RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 TPP2P29144 1249 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 AHRP35869 848 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 DR1Q01658 176 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 OC90Q02509 493 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 RGS1Q08116 209 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 MGAT5Q09328 741 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 ART3Q13508 389 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 RUNX2Q13950 521 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 TSNQ15631 228 aaKnown RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 TOR1AIP1Q5JTV8 583 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 PRAMEF9Q5VWM5 478 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 TMPRSS11BQ86T26 416 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 RPS19BP1Q86WX3 136 aaKnown RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 SIAH3Q8IW03 269 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 CHERPQ8IWX8 916 aaKnown RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 SPATA6LQ8N4H0 392 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 ATL1Q8WXF7 558 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 FRMD6Q96NE9 622 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 MCMBPQ9BTE3 642 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 PELI2Q9HAT8 420 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 ZFATQ9P243 1243 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-221ENST00000483778 NPIPA1Q9UND3 350 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 ZNF835Q9Y2P0 537 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 PCDHGB6Q9Y5F9 930 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 DNAJC13O75165 2243 aa16.88■□□□□ 0.29
ATG4B-221ENST00000483778 IGKV3D-11A0A0A0MRZ8 115 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 FAM95CA0A1B0GW59 222 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 ASPDHA6ND91 283 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 TGFBR3LH3BV60 316 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 SNRPB2P08579 225 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 MYBL2P10244 700 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 TNFRSF8P28908 595 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 GMPRP36959 345 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 RPL21P46778 160 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 HNRNPFP52597 415 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 HSF1Q00613 529 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 PDIA2Q13087 525 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 FRG1Q14331 258 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 FBXO48Q5FWF7 155 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 SLCO4C1Q6ZQN7 724 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 CA13Q8N1Q1 262 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 SLC5A8Q8N695 610 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 TMEM52Q8NDY8 209 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 FBXO36Q8NEA4 188 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 GPR137Q96N19 417 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 LRFN1Q9P244 771 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 MTO1Q9Y2Z2 717 aaKnown RBP16.87■□□□□ 0.29
ATG4B-221ENST00000483778 DYRK1BQ9Y463 629 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 CSMD1Q96PZ7 3565 aa16.87■□□□□ 0.29
ATG4B-221ENST00000483778 TCRBV16S1A1N1A0A5B0 115 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 CXorf49A8MYA2 514 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 TBX6O95947 436 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 CD46P15529 392 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 PPP2R1BP30154 601 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 HNRNPH1P31943 449 aaKnown RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 ARL4CP56559 192 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 MLF1P58340 268 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 BTN3A2P78410 334 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 ALDH6A1Q02252 535 aaKnown RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 MAPKAPK3Q16644 382 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 ADNP2Q6IQ32 1131 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 SLC25A25Q6KCM7 469 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 QSOX2Q6ZRP7 698 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 CAPN12Q6ZSI9 719 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 SYDE1Q6ZW31 735 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 ABHD13Q7L211 337 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 FGD2Q7Z6J4 655 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 MCEMP1Q8IX19 187 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 THAP3Q8WTV1 239 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-221ENST00000483778 LRRC39Q96DD0 335 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 AIF1LQ9BQI0 150 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 CAB39LQ9H9S4 337 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 SNX24Q9Y343 169 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 CLDN16Q9Y5I7 305 aa16.86■□□□□ 0.29
ATG4B-221ENST00000483778 MYOCOSA0A1B0GUC4 107 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 PABPN1LA6NDY0 278 aaKnown RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 E7ESA3 106 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 TAPBPO15533 448 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 ASNA1O43681 348 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 WISP3O95389 354 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 SERPINA6P08185 405 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 C1GALT1C1LP0DN25 315 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 RNH1P13489 461 aaKnown RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 JAK1P23458 1154 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 HTR1EP28566 365 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 NR0B1P51843 470 aaKnown RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 SPPL2CQ8IUH8 684 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 NKAPQ8N5F7 415 aaKnown RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 TBC1D19Q8N5T2 526 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 CPSF7Q8N684 471 aaKnown RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 TRPV3Q8NET8 790 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 ESAMQ96AP7 390 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 RHBDF1Q96CC6 855 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms