RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CRLF3Q8IUI8 442 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 BEST3Q8N1M1 668 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 HORMAD2Q8N7B1 307 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 MDS2Q8NDY4 140 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 GAL3ST3Q96A11 431 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 GPR22Q99680 433 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 RBBP8Q99708 897 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 UTP23Q9BRU9 249 aaKnown RBP18.64■□□□□ 0.57
HPS4-213ENST00000483631 NPLQ9BXD5 320 aaPredicted RBP18.64■□□□□ 0.57
HPS4-213ENST00000483631 RBCK1Q9BYM8 510 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 PRDM9Q9NQV7 894 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 MMACHCQ9Y4U1 282 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 ITPR2Q14571 2701 aa18.64■□□□□ 0.57
HPS4-213ENST00000483631 IGKV3D-11A0A0A0MRZ8 115 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 TCRBV16S1A1N1A0A5B0 115 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 SYNDIG1LA6NDD5 238 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 FAM159BA6NKW6 160 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 PSMD12O00232 456 aaPredicted RBP18.63■□□□□ 0.57
HPS4-213ENST00000483631 WDR47O94967 919 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 F10P00742 488 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 SSTR1P30872 391 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 GP5P40197 560 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 ZRSR2Q15696 482 aaKnown RBP18.63■□□□□ 0.57
HPS4-213ENST00000483631 GFRALQ6UXV0 394 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 TMIGD1Q6UXZ0 262 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 SLC34A3Q8N130 599 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 KRT78Q8N1N4 520 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 ARMC2Q8NEN0 867 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 SCMH1Q96GD3 660 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 PTCHD1Q96NR3 888 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 SAYSD1Q9NPB0 183 aa18.63■□□□□ 0.57
HPS4-213ENST00000483631 MTO1Q9Y2Z2 717 aaKnown RBP18.63■□□□□ 0.57
HPS4-213ENST00000483631 CROCCQ5TZA2 2017 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 A0A088AWK7 358 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 TCRBV9S1A1TA0A576 114 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 SAGE2PA6NJ88 616 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 RAD51CO43502 376 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 B4GALT2O60909 372 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 CLEC3AO75596 197 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 MLYCDO95822 493 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 STMN1P16949 149 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 ZNF10P21506 573 aaPredicted RBP18.62■□□□□ 0.57
HPS4-213ENST00000483631 RAB8AP61006 207 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 OLR1P78380 273 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 TERF2Q15554 542 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 ZKSCAN8Q15776 578 aaPredicted RBP18.62■□□□□ 0.57
HPS4-213ENST00000483631 SULT1C3Q6IMI6 304 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 ARMC10Q8N2F6 343 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 TMEM178AQ8NBL3 297 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 ADAMTS18Q8TE60 1221 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 NPAS2Q99743 824 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 GRHL1Q9NZI5 618 aa18.62■□□□□ 0.57
HPS4-213ENST00000483631 CTAGE15A4D2H0 777 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 ASPDHA6ND91 283 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 DNAJB6O75190 326 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 CCDC166P0CW27 439 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 CD46P15529 392 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 CD96P40200 585 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 RBPJQ06330 500 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 OR1C1Q15619 314 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 ADPRMQ3LIE5 342 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 TOR1AIP1Q5JTV8 583 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 MTFR2Q6P444 385 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 C3orf62Q6ZUJ4 267 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 CTAGE6Q86UF2 777 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 RPS19BP1Q86WX3 136 aaKnown RBP18.61■□□□□ 0.57
HPS4-213ENST00000483631 GPSM1Q86YR5 675 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.61■□□□□ 0.57
HPS4-213ENST00000483631 CA13Q8N1Q1 262 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 AMER2Q8N7J2 671 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 PDPRQ8NCN5 879 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 WDR34Q96EX3 536 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 FAR2Q96K12 515 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 UBXN10Q96LJ8 280 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 AICDAQ9GZX7 198 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 RAB17Q9H0T7 212 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 DPH5Q9H2P9 285 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 KLHL31Q9H511 634 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 TRIM45Q9H8W5 580 aaPredicted RBP18.61■□□□□ 0.57
HPS4-213ENST00000483631 DNAJC11Q9NVH1 559 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 SEC14L3Q9UDX4 400 aa18.61■□□□□ 0.57
HPS4-213ENST00000483631 UTP11Q9Y3A2 253 aaKnown RBP18.61■□□□□ 0.57
HPS4-213ENST00000483631 LRIT2A6NDA9 550 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 GABRR3A8MPY1 467 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 CXorf49A8MYA2 514 aaPredicted RBP18.6■□□□□ 0.57
HPS4-213ENST00000483631 B3GALT4O96024 378 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 C1QAP02745 245 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 CD1DP15813 335 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 MST1P26927 711 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 SPRP35270 261 aaPredicted RBP18.6■□□□□ 0.57
HPS4-213ENST00000483631 DCTP40126 519 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 HNF4AP41235 474 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 GDF5P43026 501 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 KCNK10P57789 538 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 RAB10P61026 200 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 SLBPQ14493 270 aaKnown RBP eCLIP18.6■□□□□ 0.57
HPS4-213ENST00000483631 KRTCAP3Q53RY4 240 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 GRTP1Q5TC63 336 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 FCRLBQ6BAA4 426 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 CAPN12Q6ZSI9 719 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms