RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 UBE3DQ7Z6J8 389 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 OR2L3Q8NG85 312 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TSACCQ96A04 125 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 RGMAQ96B86 450 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TM4SF18Q96CE8 201 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PYURFQ96I23 114 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CXorf56Q9H5V9 222 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SLC6A20Q9NP91 592 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TRNAU1APQ9NX07 287 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SPASTQ9UBP0 616 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 DNAJB9Q9UBS3 223 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PCDHGB4Q9UN71 923 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SAMD4AQ9UPU9 718 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 AP1M2Q9Y6Q5 423 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 EI24O14681 340 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 C6orf47O95873 294 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 CHRNB1P11230 501 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 DDCP20711 480 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 MVDP53602 400 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 MAPK12P53778 367 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 SRP54P61011 504 aaKnown RBP12.64□□□□□ -0.39
CPNE1-225ENST00000483495 TDGQ13569 410 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 GK3PQ14409 553 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 TMEM35AQ53FP2 167 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 ABI3BPQ7Z7G0 1075 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 NUDT13Q86X67 352 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 FAM47BQ8NA70 645 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 CIDECQ96AQ7 238 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-225ENST00000483495 VPS50Q96JG6 964 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 SLC6A16Q9GZN6 736 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 TMEM168Q9H0V1 697 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF696Q9H7X3 374 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 DDX31Q9H8H2 851 aaKnown RBP12.64□□□□□ -0.39
CPNE1-225ENST00000483495 TAAR2Q9P1P5 351 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-225ENST00000483495 KLF15Q9UIH9 416 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 DGKBQ9Y6T7 804 aa12.64□□□□□ -0.39
CPNE1-225ENST00000483495 LRIT2A6NDA9 550 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 CHURC1-FNTBB4DL54 471 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 PRAMEF26H0Y7S4 382 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 FAM58BPP0C7Q3 252 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 KDELR2P33947 212 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 GRK3P35626 688 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 AHRP35869 848 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 BCL6P41182 706 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 RABIFP47224 123 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ARFIP1P53367 373 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 TRA2BP62995 288 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 MYBPC1Q00872 1141 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 KIAA0895LQ68EN5 471 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF425Q6IV72 752 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 Q6ZS52 159 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 Q6ZSR6 202 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ADCK2Q7Z695 626 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 AMIGO1Q86WK6 493 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 NRROSQ86YC3 692 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ST13P4Q8IZP2 240 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 FBXL6Q8N531 539 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 CCL4L1Q8NHW4 92 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 TMBIM1Q969X1 311 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 DPH2Q9BQC3 489 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 C6orf106Q9H6K1 298 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 GPATCH2Q9NW75 528 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 A0A1W2PRB8 838 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 SEMG1P04279 462 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 CHRM5P08912 532 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 F3P13726 295 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF23P17027 643 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 DDX5P17844 614 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 CMPK1P30085 196 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ACTR1BP42025 376 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ACTR1AP61163 376 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 MERTKQ12866 999 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 HEPACAMQ14CZ8 416 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 SMAD2Q15796 467 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 RD3Q7Z3Z2 195 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 PLD3Q8IV08 490 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 MMP21Q8N119 569 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 ZCCHC7Q8N3Z6 543 aaKnown RBP12.63□□□□□ -0.39
CPNE1-225ENST00000483495 OR52N2Q8NGI0 321 aa12.63□□□□□ -0.39
CPNE1-225ENST00000483495 PNPT1Q8TCS8 783 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms