RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NAT8LQ8N9F0 302 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 CALML6Q8TD86 181 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 UTP15Q8TED0 518 aaKnown RBP13.01□□□□□ -0.33
VARS-226ENST00000483275 CHTF18Q8WVB6 975 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 SNF8Q96H20 258 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 TAS2R13Q9NYV9 303 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
VARS-226ENST00000483275 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
VARS-226ENST00000483275 A0A0G2JMM0 328 aa13□□□□□ -0.33
VARS-226ENST00000483275 A0A1W2PPB8 328 aa13□□□□□ -0.33
VARS-226ENST00000483275 A0A1W2PRS3 328 aa13□□□□□ -0.33
VARS-226ENST00000483275 TRBC2A0A5B9 178 aa13□□□□□ -0.33
VARS-226ENST00000483275 MAGEB16A2A368 324 aa13□□□□□ -0.33
VARS-226ENST00000483275 NKX2-6A6NCS4 301 aa13□□□□□ -0.33
VARS-226ENST00000483275 KIR3DP1A8MWS1 328 aa13□□□□□ -0.33
VARS-226ENST00000483275 EIF3FO00303 357 aaPredicted RBP13□□□□□ -0.33
VARS-226ENST00000483275 PRRG2O14669 202 aa13□□□□□ -0.33
VARS-226ENST00000483275 HS6ST1O60243 411 aa13□□□□□ -0.33
VARS-226ENST00000483275 PRMT3O60678 531 aa13□□□□□ -0.33
VARS-226ENST00000483275 JAK1P23458 1154 aa13□□□□□ -0.33
VARS-226ENST00000483275 CCND1P24385 295 aa13□□□□□ -0.33
VARS-226ENST00000483275 TOR1AIP1Q5JTV8 583 aa13□□□□□ -0.33
VARS-226ENST00000483275 ARMC3Q5W041 872 aa13□□□□□ -0.33
VARS-226ENST00000483275 UGT3A1Q6NUS8 523 aa13□□□□□ -0.33
VARS-226ENST00000483275 CCDC137Q6PK04 289 aaKnown RBP13□□□□□ -0.33
VARS-226ENST00000483275 MDGA2Q7Z553 956 aa13□□□□□ -0.33
VARS-226ENST00000483275 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
VARS-226ENST00000483275 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
VARS-226ENST00000483275 SULF2Q8IWU5 870 aa13□□□□□ -0.33
VARS-226ENST00000483275 LGI4Q8N135 537 aa13□□□□□ -0.33
VARS-226ENST00000483275 GPATCH11Q8N954 259 aa13□□□□□ -0.33
VARS-226ENST00000483275 ANKRD53Q8N9V6 530 aa13□□□□□ -0.33
VARS-226ENST00000483275 NFAM1Q8NET5 270 aaPredicted RBP13□□□□□ -0.33
VARS-226ENST00000483275 OR4K1Q8NGD4 311 aa13□□□□□ -0.33
VARS-226ENST00000483275 OR56A3Q8NH54 315 aa13□□□□□ -0.33
VARS-226ENST00000483275 NT5CQ8TCD5 201 aa13□□□□□ -0.33
VARS-226ENST00000483275 CA5BP1Q8WTZ4 195 aa13□□□□□ -0.33
VARS-226ENST00000483275 OLFM1Q99784 485 aa13□□□□□ -0.33
VARS-226ENST00000483275 HAUS8Q9BT25 410 aa13□□□□□ -0.33
VARS-226ENST00000483275 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
VARS-226ENST00000483275 IGKV3D-11A0A0A0MRZ8 115 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 MYOCOSA0A1B0GUC4 107 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 NPEPPSL1A6NEC2 478 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 E9PLN8 166 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 G3V3Y1 287 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 SLC16A5O15375 505 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 MYO1DO94832 1006 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 AHSGP02765 367 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PGAM1P18669 254 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 SCTRP47872 440 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 HLCSP50747 726 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 HNRNPFP52597 415 aaKnown RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 REEP5Q00765 189 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 RGS1Q08116 209 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 PWP1Q13610 501 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 TESK1Q15569 626 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 C18orf21Q32NC0 220 aaPredicted RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 CMPK2Q5EBM0 449 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 DUPD1Q68J44 220 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 LRRC8EQ6NSJ5 796 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 QSOX2Q6ZRP7 698 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 TRIM58Q8NG06 486 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PHF10Q8WUB8 498 aaKnown RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 SLC5A11Q8WWX8 675 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 TMEM125Q96AQ2 219 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 DEFB126Q9BYW3 111 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 ZNF223Q9UK11 482 aaPredicted RBP12.99□□□□□ -0.33
VARS-226ENST00000483275 FBXW2Q9UKT8 454 aa12.99□□□□□ -0.33
VARS-226ENST00000483275 PINLYPA6NC86 204 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PABPN1LA6NDY0 278 aaKnown RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 FAM166BA8MTA8 275 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PSMD12O00232 456 aaPredicted RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 PEX1O43933 1283 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PRKNO60260 465 aaPredicted RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 HIST1H2AGP0C0S8 130 aaPredicted RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 HIST1H2ADP20671 130 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 IL10P22301 178 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PTGS2P35354 604 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 IL2P60568 153 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CSHL1Q14406 222 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 ZNF460Q14592 562 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 RBBP5Q15291 538 aaKnown RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 HECTD2Q5U5R9 776 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 ABHD13Q7L211 337 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CCDC71Q8IV32 467 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms