RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 B3GALT2O43825 422 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 WDPCPO95876 746 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 ITGAMP11215 1152 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 EEF1DP29692 281 aaKnown RBP10.77□□□□□ -0.69
CCM2-213ENST00000480658 SSTR1P30872 391 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 KCNC1P48547 511 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 PIK3CGP48736 1102 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 PLTPP55058 493 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 PHEXP78562 749 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 BIKQ13323 160 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 EFTUD2Q15029 972 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCM2-213ENST00000480658 TBCCQ15814 346 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 FAM83EQ2M2I3 478 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 KLC3Q6P597 504 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 PRSS41Q7RTY9 318 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 CEP97Q8IW35 865 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 SLC34A3Q8N130 599 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 OR2L5Q8NG80 312 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 RHEBL1Q8TAI7 183 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 UTP15Q8TED0 518 aaKnown RBP10.77□□□□□ -0.69
CCM2-213ENST00000480658 WDR34Q96EX3 536 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 UBXN10Q96LJ8 280 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 PWWP2AQ96N64 755 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 KCNC2Q96PR1 638 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 SERINC2Q96SA4 455 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 REXO4Q9GZR2 422 aaKnown RBP10.77□□□□□ -0.69
CCM2-213ENST00000480658 RUBCNLQ9H714 662 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 LANCL2Q9NS86 450 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 CD274Q9NZQ7 290 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 SUCOQ9UBS9 1254 aaKnown RBP10.77□□□□□ -0.69
CCM2-213ENST00000480658 PTPN13Q12923 2485 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 ANKRD12Q6UB98 2062 aa10.77□□□□□ -0.69
CCM2-213ENST00000480658 MED13Q9UHV7 2174 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SAGE2PA6NJ88 616 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 KIF2AO00139 706 aaPredicted RBP10.76□□□□□ -0.69
CCM2-213ENST00000480658 MASP2O00187 686 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 E2F3O00716 465 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SEMA7AO75326 666 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 JRKO75564 520 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CDC123O75794 336 aaPredicted RBP10.76□□□□□ -0.69
CCM2-213ENST00000480658 WISP3O95389 354 aaPredicted RBP10.76□□□□□ -0.69
CCM2-213ENST00000480658 LDLRP01130 860 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 STSP08842 583 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CD1DP15813 335 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 MAGEA4P43358 317 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 ARFIP1P53367 373 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SLC26A5P58743 744 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SLBPQ14493 270 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCM2-213ENST00000480658 ZNF460Q14592 562 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 WHAMMP3Q1A5X7 153 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 TMEM35AQ53FP2 167 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 KRTCAP3Q53RY4 240 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 ZNF766Q5HY98 468 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 C10orf62Q5T681 223 aaPredicted RBP10.76□□□□□ -0.69
CCM2-213ENST00000480658 TMEM207Q6UWW9 146 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 SLCO4C1Q6ZQN7 724 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 LANCL3Q6ZV70 420 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CCDC25Q86WR0 208 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 ZNF595Q8IYB9 648 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 ANKRD53Q8N9V6 530 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 POGLUT1Q8NBL1 392 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CCT6BQ92526 530 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 TMEM125Q96AQ2 219 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 REPS1Q96D71 796 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 PTCHD1Q96NR3 888 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 MACROD1Q9BQ69 325 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CCDC77Q9BR77 488 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 GRHL1Q9NZI5 618 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 TMCO1Q9UM00 188 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 CSAG2Q9Y5P2 127 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 IKBKGQ9Y6K9 419 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCM2-213ENST00000480658 HEATR5BQ9P2D3 2071 aa10.76□□□□□ -0.69
CCM2-213ENST00000480658 TCRBV16S1A1N1A0A5B0 115 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 LRIT2A6NDA9 550 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 ZNF860A6NHJ4 632 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 NCF1BA6NI72 391 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 NCF1CA8MVU1 366 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 ERI3O43414 337 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 DYRK3O43781 588 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 UGDHO60701 494 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 KERAO60938 352 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 STATHP02808 62 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 LTA4HP09960 611 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 SMIM10L1P0DMW3 83 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 NCF1P14598 390 aaPredicted RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 EPB42P16452 691 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 PPP2R1BP30154 601 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CASP2P42575 452 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CYB561P49447 251 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 CLCN2P51788 898 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 MTTPP55157 894 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 RAB8AP61006 207 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 IRF8Q02556 426 aa10.75□□□□□ -0.69
CCM2-213ENST00000480658 SRSF11Q05519 484 aaKnown RBP10.75□□□□□ -0.69
CCM2-213ENST00000480658 C2orf54Q08AI8 447 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms