RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 ARHGAP22Q7Z5H3 698 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 NUDT13Q86X67 352 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 FUNDC1Q8IVP5 155 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 D2HGDHQ8N465 521 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 POU5F2Q8N7G0 328 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 PROKR1Q8TCW9 393 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 UTP15Q8TED0 518 aaKnown RBP16.73■□□□□ 0.27
UPF3A-206ENST00000480362 EGLN2Q96KS0 407 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 CDC6Q99741 560 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TBCDQ9BTW9 1192 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 TUBB6Q9BUF5 446 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 DPY30Q9C005 99 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 PRDM7Q9NQW5 492 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 HCN4Q9Y3Q4 1203 aa16.73■□□□□ 0.27
UPF3A-206ENST00000480362 CACNA1HO95180 2353 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 UNC13CQ8NB66 2214 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 ARHGAP10A1A4S6 786 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 C9JVG2 144 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 TXNDC9O14530 226 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 ANKRD34CP0C6C1 535 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 SMIM10L1P0DMW3 83 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 T-ENOLP0DO92 83 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 THRAP10827 490 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 COX4I1P13073 169 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 IL12AP29459 219 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 SSR2P43308 183 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 CLDN8P56748 225 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 BNIP1Q12981 228 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 SPIDRQ14159 915 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 STPG1Q5TH74 334 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 FAM9CQ8IZT9 166 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 AMER3Q8N944 861 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 CDC26Q8NHZ8 85 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 RP9Q8TA86 221 aaKnown RBP16.72■□□□□ 0.27
UPF3A-206ENST00000480362 ZCCHC10Q8TBK6 192 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 C16orf78Q8WTQ4 265 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
UPF3A-206ENST00000480362 GAL3ST3Q96A11 431 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 CMTM5Q96DZ9 223 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 SMIM10Q96HG1 83 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 CCDC74BQ96LY2 380 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF285Q96NJ3 590 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 KCNC2Q96PR1 638 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 TEFMQ96QE5 360 aaKnown RBP16.72■□□□□ 0.27
UPF3A-206ENST00000480362 DDX31Q9H8H2 851 aaKnown RBP16.72■□□□□ 0.27
UPF3A-206ENST00000480362 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 ADAM29Q9UKF5 820 aa16.72■□□□□ 0.27
UPF3A-206ENST00000480362 LRATO95237 230 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 B3GALT4O96024 378 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 SNRPB2P08579 225 aaKnown RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ESRRAP11474 423 aaPredicted RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 FOLR1P15328 257 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 JAK1P23458 1154 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ATP5A1P25705 553 aaKnown RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ASMTP46597 345 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 SNRPNP63162 240 aaKnown RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 BTN3A2P78410 334 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF763Q0D2J5 394 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 CYLC2Q14093 348 aaPredicted RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 HERC3Q15034 1050 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 GPR19Q15760 415 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 PRTGQ2VWP7 1150 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 TMEM214Q6NUQ4 689 aaKnown RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ZNF793Q6ZN11 406 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 SNX32Q86XE0 403 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 KRTCAP2Q8N6L1 136 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 OR8K5Q8NH50 307 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 NUDT8Q8WV74 236 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 TMEM74Q96NL1 305 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 ZBTB18Q99592 522 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 SPRTNQ9H040 489 aaPredicted RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 TMEM45AQ9NWC5 275 aa16.71■□□□□ 0.27
UPF3A-206ENST00000480362 MRPS2Q9Y399 296 aaKnown RBP16.71■□□□□ 0.27
UPF3A-206ENST00000480362 WDFY4Q6ZS81 3184 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 A0A0A6YYD5 115 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 FAM234BA2RU67 622 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 D6RAR5 112 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 NR5A2O00482 541 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 AKAP10O43572 662 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 ALOX12P18054 663 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 HIST1H1TP22492 207 aaPredicted RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 TSFMP43897 325 aaKnown RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 ZFP36L2P47974 494 aaKnown RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 MAPK12P53778 367 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 TAS2R50P59544 299 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 CCDC157Q569K6 752 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 TCTE1Q5JU00 501 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 PHF19Q5T6S3 580 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 BLOC1S3Q6QNY0 202 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 ABHD13Q7L211 337 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 PIP4P1Q86T03 277 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 SLITRK4Q8IW52 837 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 ACOT4Q8N9L9 421 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 RCBTB1Q8NDN9 531 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 GFM2Q969S9 779 aaKnown RBP16.7■□□□□ 0.26
UPF3A-206ENST00000480362 PHOX2BQ99453 314 aa16.7■□□□□ 0.26
UPF3A-206ENST00000480362 ROGDIQ9GZN7 287 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms