RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 F2RL3Q96RI0 385 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 GFM1Q96RP9 751 aaKnown RBP11.99□□□□□ -0.49
SIK3-209ENST00000480222 SLC25A23Q9BV35 468 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 EBPLQ9BY08 206 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 ZNF717Q9BY31 904 aaPredicted RBP11.99□□□□□ -0.49
SIK3-209ENST00000480222 SYNDIG1Q9H7V2 258 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 SYNPO2LQ9H987 977 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 COPS7BQ9H9Q2 264 aaPredicted RBP11.99□□□□□ -0.49
SIK3-209ENST00000480222 FANCEQ9HB96 536 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 FAM60AQ9NP50 221 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 MYNNQ9NPC7 610 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
SIK3-209ENST00000480222 OTOGLQ3ZCN5 2332 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 FAM234BA2RU67 622 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 BBIP1A8MTZ0 92 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 SAP18O00422 153 aaKnown RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 CBFA2T3O75081 653 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 SH3BGRLO75368 114 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 UNC5CO95185 931 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 DDX5P17844 614 aaKnown RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 NELFEP18615 380 aaKnown RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 PRPS1L1P21108 318 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 HIST1H1TP22492 207 aaPredicted RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 TGM1P22735 817 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 HPCAL1P37235 193 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 GABRA4P48169 554 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 EMP3P54852 163 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 CLDN8P56748 225 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 BNIP1Q12981 228 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 TRA2AQ13595 282 aaKnown RBP eCLIP11.98□□□□□ -0.49
SIK3-209ENST00000480222 SPIDRQ14159 915 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 COQ5Q5HYK3 327 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 GARNL3Q5VVW2 1013 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 OR4C11Q6IEV9 310 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 TMEM214Q6NUQ4 689 aaKnown RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 CYB5D1Q6P9G0 228 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 USP53Q70EK8 1073 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 ZNF771Q7L3S4 317 aaPredicted RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 PROKR1Q8TCW9 393 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 TESCQ96BS2 214 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 C17orf62Q9BQA9 187 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 DPY30Q9C005 99 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 ACTL8Q9H568 366 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 DDX31Q9H8H2 851 aaKnown RBP11.98□□□□□ -0.49
SIK3-209ENST00000480222 RXFP3Q9NSD7 469 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 CCDC167Q9P0B6 97 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 TMEM9Q9P0T7 183 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 SLC22A7Q9Y694 548 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 RP1P56715 2156 aa11.98□□□□□ -0.49
SIK3-209ENST00000480222 LOC105369274A0A096LPK9 316 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 A0A0A6YYD5 115 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 LOC102723532A0A0G2JNH3 316 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 IGHV5-10-1A0A0J9YXX1 117 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 FITM1A5D6W6 292 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 C4orf47A7E2U8 309 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 SH3BP5O60239 455 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 PRAMEF10O60809 474 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 GUCY1B2O75343 617 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 SNRPB2P08579 225 aaKnown RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 ESRRAP11474 423 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 COX4I1P13073 169 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 TACR1P25103 407 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 TPP2P29144 1249 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 RASSF2P50749 326 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 MAPK12P53778 367 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 PLA2G16P53816 162 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 MTTPP55157 894 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 KCNK10P57789 538 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 VSX2P58304 361 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 STX5Q13190 355 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 CYLC2Q14093 348 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 PRTGQ2VWP7 1150 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 AGKQ53H12 422 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 LACTB2Q53H82 288 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 SNAP47Q5SQN1 464 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 CCNYL2Q5T2Q4 361 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 PAOXQ6QHF9 649 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 BLOC1S3Q6QNY0 202 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 UBE3DQ7Z6J8 389 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 SNX32Q86XE0 403 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 OR4N4Q8N0Y3 316 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 OR9I1Q8NGQ6 314 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 UTP15Q8TED0 518 aaKnown RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 ZNF764Q96H86 408 aaPredicted RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 NSL1Q96IY1 281 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 CCDC74BQ96LY2 380 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 TMEM74Q96NL1 305 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 TSSK3Q96PN8 268 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 AICDAQ9GZX7 198 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 CLMPQ9H6B4 373 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 LHX9Q9NQ69 397 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 ARL8BQ9NVJ2 186 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
SIK3-209ENST00000480222 ATXN7L1Q9ULK2 861 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms