RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 ATP6AP1LQ52LC2 224 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 C6orf136Q5SQH8 315 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 PAGE2Q7Z2X7 111 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 UBE3DQ7Z6J8 389 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 NUDT13Q86X67 352 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZCCHC7Q8N3Z6 543 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 CEP70Q8NHQ1 597 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 PROKR1Q8TCW9 393 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 CHTF18Q8WVB6 975 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 C10orf82Q8WW14 230 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 TUBGCP3Q96CW5 907 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 QRFPRQ96P65 431 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 F2RL3Q96RI0 385 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 MACROD1Q9BQ69 325 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 CCDC28BQ9BUN5 200 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 MRPL1Q9BYD6 325 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 ASPSCR1Q9BZE9 553 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 SPRTNQ9H040 489 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 KLHL31Q9H511 634 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 DDX31Q9H8H2 851 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 APMAPQ9HDC9 416 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 TCF7L2Q9NQB0 619 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 CUTCQ9NTM9 273 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 MCM8Q9UJA3 840 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 MRPS2Q9Y399 296 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 SEC16AO15027 2179 aa11.92□□□□□ -0.5
TRAPPC12-218ENST00000479897 NUP210LQ5VU65 1888 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 A0A1B0GX78 115 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ATP6AP2A0A1C7CYW4 349 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 DSCR3O14972 297 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 FOXS1O43638 330 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SNX3O60493 162 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 GALR3O60755 368 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 DIAPH2O60879 1101 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 CPNE3O75131 537 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SCRG1O75711 98 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ATP6AP2O75787 350 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 MED26O95402 600 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ONECUT2O95948 504 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 FAM107AO95990 144 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 STATHP02808 62 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 JMJD7P0C870 316 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF888P0CJ79 500 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 PCSK2P16519 638 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 LBPP18428 481 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ITIH1P19827 911 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 EPHA3P29320 983 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ETV5P41161 510 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 GSTM5P46439 218 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 IDH3AP50213 366 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ERVK-8P63133 956 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 RPL38P63173 70 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ACSM2AQ08AH3 577 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 AP5B1Q2VPB7 878 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 DCAF12Q5T6F0 453 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ACSM2BQ68CK6 577 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 PWWP2BQ6NUJ5 590 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF793Q6ZN11 406 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ACAD11Q709F0 780 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 CPLX4Q7Z7G2 160 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMEM126BQ8IUX1 230 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 C1orf52Q8N6N3 182 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZCCHC10Q8TBK6 192 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 APIPQ96GX9 242 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 TAAR9Q96RI9 348 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 C17orf62Q9BQA9 187 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 EBF4Q9BQW3 602 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 NDC1Q9BTX1 674 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 AKTIPQ9H8T0 292 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 STARD5Q9NSY2 213 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 IRAK4Q9NWZ3 460 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SLC39A1Q9NY26 324 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 DCTN4Q9UJW0 460 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SATB2Q9UPW6 733 aa11.91□□□□□ -0.5
TRAPPC12-218ENST00000479897 SPTBN4Q9H254 2564 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 A0A0A6YYD5 115 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 A0A0G2JND7 137 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 H0YIG0 161 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF749O43361 778 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SEC22BO75396 215 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 TIAF1O95411 115 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 IL1RNP18510 177 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 HIST1H1TP22492 207 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ATP5A1P25705 553 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 MAPK1P28482 360 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 TPP2P29144 1249 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SSR2P43308 183 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 MRPL19P49406 292 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ARFIP2P53365 341 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms