RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DPEP1P16444 411 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GNB3P16520 340 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 EIF2S2P20042 333 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 TCN1P20061 433 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 CYP2B6P20813 491 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CYP3A5P20815 502 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SYT1P21579 422 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 AHCYP23526 432 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CCNE1P24864 410 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 HLA-FP30511 346 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CHRNA7P36544 502 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 NUP62P37198 522 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 DCTP40126 519 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SLC15A1P46059 708 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CDKN1BP46527 198 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GABRB2P47870 512 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SLC9A3P48764 834 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SUCLG1P53597 346 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 SRP54P61011 504 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 HNRNPKP61978 463 aaKnown RBP eCLIP2.35□□□□□ -2.03
XRN1-211ENST00000477237 PSMC6P62333 389 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 PRAMEP78395 509 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF33BQ06732 778 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 EPS8Q12929 822 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CHAF1BQ13112 559 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 DDX39BQ13838 428 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 EIF2S3LQ2VIR3 472 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 NKAIN1Q4KMZ8 207 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TCP11X2Q5H9J9 407 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GLRA4Q5JXX5 417 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TMEM31Q5JXX7 168 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 C10orf120Q5SQS8 335 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 MARCH8Q5T0T0 291 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 PRAMEF20Q5VT98 475 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 GARNL3Q5VVW2 1013 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TANGO2Q6ICL3 276 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 FAM53AQ6NSI3 398 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 LRRC8EQ6NSJ5 796 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SCYL2Q6P3W7 929 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 BLOC1S2Q6QNY1 142 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 LINC00696Q6ZRV3 163 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 RFPL4BQ6ZWI9 263 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CAMKMTQ7Z624 323 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 PHLDB2Q86SQ0 1253 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 NOXA1Q86UR1 476 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 LONP2Q86WA8 852 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 METTL23Q86XA0 190 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TUSC5Q8IXB3 177 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 PM20D2Q8IYS1 436 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF679Q8IYX0 411 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SYCE1Q8N0S2 351 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 RASGEF1CQ8N431 466 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SFRP1Q8N474 314 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 AMER3Q8N944 861 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 BANPQ8N9N5 519 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 EIF1ADQ8N9N8 165 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TRPV3Q8NET8 790 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 BBS1Q8NFJ9 593 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 OR2T34Q8NGX1 318 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 OR6Y1Q8NGX8 325 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CFAP61Q8NHU2 1237 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 UBA3Q8TBC4 463 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 ZNF473Q8WTR7 871 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 CCDC12Q8WUD4 166 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 SLC44A1Q8WWI5 657 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 OR1E3Q8WZA6 343 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 MR1Q95460 341 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 FAM162AQ96A26 154 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CCDC127Q96BQ5 260 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 RMDN1Q96DB5 314 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 FAM122AQ96E09 287 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 FAM120BQ96EK7 910 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 PGAP3Q96FM1 320 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 PGM2Q96G03 612 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CALML4Q96GE6 196 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 MAGED4Q96JG8 741 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 NSMCE3Q96MG7 304 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CFAP57Q96MR6 1250 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 BBS4Q96RK4 519 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CYTH2Q99418 400 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TSC22D3Q99576 134 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 OPRPNQ99935 248 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 RBM4BQ9BQ04 359 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 PYM1Q9BRP8 204 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 MTG1Q9BT17 334 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 CALN1Q9BXU9 219 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 POLR1EQ9GZS1 481 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 C6orf62Q9GZU0 229 aaPredicted RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 TWSG1Q9GZX9 223 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 THAP2Q9H0W7 228 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 CUEDC2Q9H467 287 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 DHX33Q9H6R0 707 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 COQ10BQ9H8M1 238 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 EPB41L5Q9HCM4 733 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 TREM1Q9NP99 234 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 PIH1D3Q9NQM4 214 aaKnown RBP2.35□□□□□ -2.03
XRN1-211ENST00000477237 BABAM1Q9NWV8 329 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 RHBDL2Q9NX52 303 aa2.35□□□□□ -2.03
XRN1-211ENST00000477237 SMPD3Q9NY59 655 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms