RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 FBXO36Q8NEA4 188 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 THAP3Q8WTV1 239 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 RHBDF1Q96CC6 855 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CAPZA3Q96KX2 299 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 GPR137Q96N19 417 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 FRMD6Q96NE9 622 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PTCHD1Q96NR3 888 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 LPAR4Q99677 370 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 UTP23Q9BRU9 249 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CDCP1Q9H5V8 836 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TRIM45Q9H8W5 580 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ZFATQ9P243 1243 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 C19orf25Q9UFG5 118 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TEKT2Q9UIF3 430 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SH3BGRL2Q9UJC5 107 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TINAGQ9UJW2 476 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PCM1Q15154 2024 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 MDC1Q14676 2089 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 FAM95CA0A1B0GW59 222 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TCRBV16S1A1N1A0A5B0 115 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 LRIT2A6NDA9 550 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TMEM200CA6NKL6 621 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 A8MUA0 341 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 CXorf49A8MYA2 514 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PRSS44E7EML9 344 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 NPIPA5E9PKD4 350 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 C19orf84I3L1E1 186 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ADAM10O14672 748 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 NDC80O14777 642 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ZSCAN12O43309 604 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 HNRNPRO43390 633 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PRMT3O60678 531 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 C1QAP02745 245 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SP1P08047 785 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SERPINA6P08185 405 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TCP1P17987 556 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 EPORP19235 508 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TNFRSF8P28908 595 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PPP2R1BP30154 601 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 HNRNPH1P31943 449 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 GMPRP36959 345 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 RPL21P46778 160 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SLC6A12P48065 614 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 HNRNPFP52597 415 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 MLF1P58340 268 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 BTN3A2P78410 334 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 MGAT5Q09328 741 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PDIA2Q13087 525 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ART3Q13508 389 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TSNQ15631 228 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF630Q2M218 657 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 FBXO48Q5FWF7 155 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SLC25A25Q6KCM7 469 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 FAM45BPQ6NSW5 357 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 C16orf47Q6ZP98 133 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 Q6ZPB1 254 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 QSOX2Q6ZRP7 698 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ABHD13Q7L211 337 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 GALNTL5Q7Z4T8 443 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 RPS19BP1Q86WX3 136 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SPPL2CQ8IUH8 684 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 MCEMP1Q8IX19 187 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 CYP4X1Q8N118 509 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 CA13Q8N1Q1 262 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 CPSF7Q8N684 471 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 APCDD1LQ8NCL9 501 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 SUN3Q8TAQ9 357 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 FAM45AQ8TCE6 357 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ATL1Q8WXF7 558 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ANKRD7Q92527 254 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ESAMQ96AP7 390 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 LRRC39Q96DD0 335 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 MS4A6EQ96DS6 147 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TRIM54Q9BYV2 358 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 TRIM31Q9BZY9 425 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 CAB39LQ9H9S4 337 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PELI2Q9HAT8 420 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF223Q9UK11 482 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ZNF490Q9ULM2 529 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 NPIPA1Q9UND3 350 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 PPIEQ9UNP9 301 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 MTO1Q9Y2Z2 717 aaKnown RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 OARD1Q9Y530 152 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 ASB1Q9Y576 335 aa6.57□□□□□ -1.36
HDAC3-207ENST00000475549 KLF2Q9Y5W3 355 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-207ENST00000475549 A0A0G2JN53 185 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 CYR61O00622 381 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 ASNA1O43681 348 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 PRKNO60260 465 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-207ENST00000475549 NME2P1O60361 137 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 SLC25A12O75746 678 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 UQCRHP07919 91 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 C1GALT1C1LP0DN25 315 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 CD46P15529 392 aa6.56□□□□□ -1.36
HDAC3-207ENST00000475549 POU3F2P20265 443 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms