RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SERTAD3Q9UJW9 196 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 TSC22D4Q9Y3Q8 395 aa6.64□□□□□ -1.35
LIMD1-204ENST00000474665 CSMD1Q96PZ7 3565 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 LOC101059948A0A1B0GTJ6 334 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 WDR91A4D1P6 747 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MAGEB17A8MXT2 336 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM233B4DJY2 109 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MEN1O00255 615 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 BIRC5O15392 142 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 NDUFS4O43181 175 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ITM2AO43736 263 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 DIAPH2O60879 1101 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CPNE3O75131 537 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 SH3BGRLO75368 114 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CLEC3AO75596 197 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 LYPLA1O75608 230 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 KLHL18O94889 574 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 AGFG2O95081 481 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ZWINTO95229 277 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CLDN9O95484 217 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ESRRBO95718 433 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 OTCP00480 354 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 SERPINA6P08185 405 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CHN1P15882 459 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 SERPINB3P29508 390 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 HNF4AP41235 474 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 OR1D4P47884 311 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 HTR6P50406 440 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CCNG1P51959 295 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 EFNA3P52797 238 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 EMP3P54852 163 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CENPEQ02224 2701 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 PWP1Q13610 501 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 GRM7Q14831 915 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 RBBP5Q15291 538 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 TBR1Q16650 682 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 UGT3A2Q3SY77 523 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ARL13AQ5H913 290 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MED27Q6P2C8 311 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 GPRIN3Q6ZVF9 776 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 TTLL10Q6ZVT0 673 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MILR1Q7Z6M3 343 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 GPR135Q8IZ08 494 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 METTL27Q8N6F8 245 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ANKRD42Q8N9B4 389 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CCDC63Q8NA47 563 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 UTP15Q8TED0 518 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MS4A6EQ96DS6 147 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CCDC126Q96EE4 140 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 LRFN5Q96NI6 719 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 QRFPRQ96P65 431 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 F2RL3Q96RI0 385 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CCNL2Q96S94 520 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 HBEGFQ99075 208 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 SORT1Q99523 831 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MTERF1Q99551 399 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 MS4A8Q9BY19 250 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF717Q9BY31 904 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 SHCBP1LQ9BZQ2 653 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 PITHD1Q9GZP4 211 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 IQCGQ9H095 443 aaKnown RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 STMN4Q9H169 189 aaPredicted RBP6.63□□□□□ -1.35
LIMD1-204ENST00000474665 CHST8Q9H2A9 424 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 FANCEQ9HB96 536 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 DMRT3Q9NQL9 472 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 TIMM22Q9Y584 194 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 ANGPTL3Q9Y5C1 460 aa6.63□□□□□ -1.35
LIMD1-204ENST00000474665 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 A0A0A6YYC8 382 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 A0A0G2JN53 185 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 A0A1B0GX78 115 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF860A6NHJ4 632 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 GOLGA6L10A6NI86 522 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 HMGB1P1B2RPK0 211 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 STMND1H3BQB6 276 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 I3L1I5 382 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MANBAO00462 879 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 DSCR3O14972 297 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MAP3K7O43318 606 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 NPHS1O60500 1241 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 RAD1O60671 282 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 GALR3O60755 368 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 KLF7O75840 302 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MLYCDO95822 493 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 TGFB1P01137 390 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SERPIND1P05546 499 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF888P0CJ79 500 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 IL1RNP18510 177 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 BGNP21810 368 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CXCR2P25025 360 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CD82P27701 267 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 HPDP32754 393 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 GRK3P35626 688 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CASRP41180 1078 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 STAT5AP42229 794 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PIK3CBP42338 1070 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PKNOX1P55347 436 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms