RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SNX7Q9UNH6 387 aa20.81■□□□□ 0.92
CCM2-206ENST00000474617 F5P12259 2224 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 EIF4E1BA6NMX2 242 aaKnown RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 H7BY64 318 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 MAN2B1O00754 1011 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 NDUFS4O43181 175 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 PRICKLE3O43900 615 aaPredicted RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 IFNA14P01570 189 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 ALPLP05186 524 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 DRD2P14416 443 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 NDUFV2P19404 249 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 MAT2AP31153 395 aaKnown RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 BSGP35613 385 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 CCR5P51681 352 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 RPS6KA3P51812 740 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 CCINQ13939 588 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 TTC23Q5W5X9 447 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 PATL1Q86TB9 770 aaKnown RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 ANKRD53Q8N9V6 530 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 RPLP0P6Q8NHW5 317 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 OR5P2Q8WZ92 322 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 PRAP1Q96NZ9 151 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 TM9SF3Q9HD45 589 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 POLMQ9NP87 494 aaPredicted RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 CUEDC1Q9NWM3 386 aaPredicted RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 ZSCAN32Q9NX65 697 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 TAS2R7Q9NYW3 318 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 FAF1Q9UNN5 650 aaPredicted RBP20.8■□□□□ 0.92
CCM2-206ENST00000474617 DMTF1Q9Y222 760 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 V9GYQ6 96 aa20.8■□□□□ 0.92
CCM2-206ENST00000474617 A0A1W2PRB8 838 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 C2CD4DB7Z1M9 353 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 C10orf142B7Z368 130 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 OR1F1O43749 312 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 FKBP9O95302 570 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 IL3P08700 152 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 UQCRC2P22695 453 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 TPMTP51580 245 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 NR1H2P55055 460 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 APOFQ13790 326 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 MLC1Q15049 377 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 ZNF630Q2M218 657 aaPredicted RBP20.79■□□□□ 0.92
CCM2-206ENST00000474617 ANKRD26P1Q6NSI1 321 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 CLEC4FQ8N1N0 589 aa20.79■□□□□ 0.92
CCM2-206ENST00000474617 MAGEE2Q8TD90 523 aaPredicted RBP20.79■□□□□ 0.92
CCM2-206ENST00000474617 ZNF717Q9BY31 904 aaPredicted RBP20.79■□□□□ 0.92
CCM2-206ENST00000474617 USP36Q9P275 1121 aaKnown RBP20.79■□□□□ 0.92
CCM2-206ENST00000474617 H3BNH8 94 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 YY2O15391 372 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 MAP3K13O43283 966 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SH3BGRLO75368 114 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SMIM18P0DKX4 95 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 RABIFP47224 123 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 HBA1P69905 142 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 TGM3Q08188 693 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SLC14A1Q13336 389 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SF1Q15637 639 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 CYBRD1Q53TN4 286 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ZC3H12BQ5HYM0 836 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 GCNT6Q5T4J0 391 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 DUS1LQ6P1R4 473 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 USP51Q70EK9 711 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ZNF551Q7Z340 670 aaPredicted RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 ZDHHC21Q8IVQ6 265 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCM2-206ENST00000474617 LMNTD1Q8N9Z9 388 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 PJA1Q8NG27 643 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 FAM3CQ92520 227 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SLC35A5Q9BS91 424 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 FAIM2Q9BWQ8 316 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 GABARAPL1Q9H0R8 117 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SLC6A17Q9H1V8 727 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SLC2A4RGQ9NR83 387 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ACSS1Q9NUB1 689 aaPredicted RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 THUMPD1Q9NXG2 353 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 C3orf18Q9UK00 162 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ZNF451Q9Y4E5 1061 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ORC6Q9Y5N6 252 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SAP18O00422 153 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 NOBOXO60393 691 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 KLHL18O94889 574 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SEMG1P04279 462 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 THRBP10828 461 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 DGKEP52429 567 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ADARB1P78563 741 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 GK3PQ14409 553 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ADPRMQ3LIE5 342 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ZNF385BQ569K4 471 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 SHQ1Q6PI26 577 aaKnown RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 ENPP7Q6UWV6 458 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 CCDC80Q76M96 950 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 STK32CQ86UX6 486 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 C10orf111Q8N326 155 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 C2orf73Q8N5S3 287 aaPredicted RBP20.78■□□□□ 0.92
CCM2-206ENST00000474617 FAM86B1Q8N7N1 296 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 TM4SF18Q96CE8 201 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 NLNQ9BYT8 704 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 ANKMY1Q9P2S6 941 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 THEGQ9P2T0 379 aa20.78■□□□□ 0.92
CCM2-206ENST00000474617 TCRBV21S2A2A0A5A6 115 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms