RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 GALNT5Q7Z7M9 940 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 ACOT1Q86TX2 421 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 GDPD1Q8N9F7 314 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 NETO2Q8NC67 525 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 CLEC4CQ8WTT0 213 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 FICDQ9BVA6 458 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 C1QTNF3Q9BXJ4 246 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 CSNK1G3Q9Y6M4 447 aa9.73□□□□□ -0.85
APTX-216ENST00000472896 ASCC3Q8N3C0 2202 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 ANKRD11Q6UB99 2663 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 NUP205Q92621 2012 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 A0A0U1RQS6 177 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ANTXRLA6NF34 631 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 EFCAB10A6NFE3 127 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 CLCA1A8K7I4 914 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 M0QZQ0 153 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 STX16O14662 325 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 KIAA0513O60268 411 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ATG13O75143 517 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 SLC22A5O76082 557 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 RHOBTB1O94844 696 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ZIC2O95409 532 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 RPS17P08708 135 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ATF4P18848 351 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 FDXRP22570 491 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 CCNCP24863 283 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 WEE1P30291 646 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ADRA1AP35348 466 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ADRA1BP35368 520 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 KCNC1P48547 511 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ALDH9A1P49189 494 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 SUOXP51687 545 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 PCDH1Q08174 1060 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 GPR17Q13304 367 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 MAB21L1Q13394 359 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 RUNX3Q13761 415 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 SOWAHCQ53LP3 525 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 LRRC66Q68CR7 880 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 OR2T5Q6IEZ7 315 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ZNF549Q6P9A3 640 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 TP53INP2Q8IXH6 220 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 GPALPP1Q8IXQ4 340 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 ANKRD53Q8N9V6 530 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 FNDC5Q8NAU1 212 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 GLB1L3Q8NCI6 653 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 OR2T29Q8NH02 315 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 PTERQ96BW5 349 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 TOE1Q96GM8 510 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 Q96MT0 163 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 KCNA7Q96RP8 456 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 MCCC1Q96RQ3 725 aaPredicted RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 ZBTB18Q99592 522 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 LPIN3Q9BQK8 851 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 OR51E2Q9H255 320 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 GLOD4Q9HC38 313 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 SPASTQ9UBP0 616 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 SLC2A6Q9UGQ3 507 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 PHF11Q9UIL8 331 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 KLK13Q9UKR3 277 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 AGO1Q9UL18 857 aaKnown RBP9.72□□□□□ -0.85
APTX-216ENST00000472896 V9GYH0 126 aa9.72□□□□□ -0.85
APTX-216ENST00000472896 DMXL2Q8TDJ6 3036 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 MTMR11A4FU01 709 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 E5RI56 91 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.85
APTX-216ENST00000472896 DPM1O60762 260 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 TSPAN12O95859 305 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 NAT2P11245 290 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 BCKDHBP21953 392 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 CBLP22681 906 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 DSTNP60981 165 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 YWHAHQ04917 246 aaPredicted RBP9.71□□□□□ -0.85
APTX-216ENST00000472896 PLD1Q13393 1074 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 SEMA3AQ14563 771 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 IRF3Q14653 427 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 GPR19Q15760 415 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 SMN1Q16637 294 aaKnown RBP9.71□□□□□ -0.85
APTX-216ENST00000472896 PFKFB4Q16877 469 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 SETMARQ53H47 684 aaPredicted RBP9.71□□□□□ -0.85
APTX-216ENST00000472896 C6orf136Q5SQH8 315 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 OTUD1Q5VV17 481 aaPredicted RBP9.71□□□□□ -0.85
APTX-216ENST00000472896 GARNL3Q5VVW2 1013 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 RAP1GAP2Q684P5 730 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 TMEM207Q6UWW9 146 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 ZDHHC21Q8IVQ6 265 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 CYP4Z2PQ8N1L4 340 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 FBXO39Q8N4B4 442 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 CHTF18Q8WVB6 975 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 BTN2A2Q8WVV5 523 aa9.71□□□□□ -0.85
APTX-216ENST00000472896 APH1BQ8WW43 257 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms