RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C3orf36Q3SXR2 165 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TUBB8Q3ZCM7 444 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 NKAIN1Q4KMZ8 207 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PDCD4Q53EL6 469 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 DNAJC21Q5F1R6 531 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 VWA2Q5GFL6 755 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MLIPQ5VWP3 458 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TXNRD3NBQ6F5E7 133 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PRMT9Q6P2P2 845 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 FAM199XQ6PEV8 388 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 ISLR2Q6UXK2 745 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PACS1Q6VY07 963 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CERS6Q6ZMG9 384 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 NLRP9Q7RTR0 991 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PID1Q7Z2X4 250 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CCDC50Q8IVM0 306 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CFAP206Q8IYR0 622 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 KATNAL2Q8IYT4 538 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ULK2Q8IYT8 1036 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TBC1D21Q8IYX1 336 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ZBTB2Q8N680 514 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 RBMXL3Q8N7X1 1067 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 GPATCH11Q8N954 259 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OR4E2Q8NGC2 313 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OR52E1Q8NGJ3 308 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OR1L3Q8NH93 324 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 OR5K2Q8NHB8 316 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CCDC110Q8TBZ0 833 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MAGEC3Q8TD91 643 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 SLC25A43Q8WUT9 341 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 FAR1Q8WVX9 515 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 NRG4Q8WWG1 115 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 STON2Q8WXE9 905 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 RAPGEF5Q92565 580 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 TFGQ92734 400 aaPredicted RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 EID2BQ96D98 161 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MVB12AQ96EY5 273 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 RMDN2Q96LZ7 410 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 QKIQ96PU8 341 aaKnown RBP eCLIP3.35□□□□□ -1.87
XRN1-209ENST00000472625 TRAPPC9Q96Q05 1148 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 SLX1AQ9BQ83 275 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 FICDQ9BVA6 458 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 LHPPQ9H008 270 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 SLC26A1Q9H2B4 701 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 BPIFA1Q9NP55 256 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 LMBRD1Q9NUN5 540 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 C14orf105Q9NVL8 296 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ASF1BQ9NVP2 202 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ABI3Q9P2A4 366 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 COPG2Q9UBF2 871 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MCM8Q9UJA3 840 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 PLCL2Q9UPR0 1127 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 ASF1AQ9Y294 204 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 MRPS2Q9Y399 296 aaKnown RBP3.35□□□□□ -1.87
XRN1-209ENST00000472625 CELSR2Q9HCU4 2923 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 CENPEQ02224 2701 aa3.35□□□□□ -1.87
XRN1-209ENST00000472625 LRBAP50851 2863 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 A0A0U1RQS6 177 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CENPVL1A0A0U1RR11 272 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 MACROD2A1Z1Q3 448 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 TMEM200CA6NKL6 621 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 ERI2A8K979 691 aaKnown RBP3.34□□□□□ -1.87
XRN1-209ENST00000472625 GOLGA6L6A8MZA4 724 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 PRSS44E7EML9 344 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 H7C0S8 307 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 AP3B1O00203 1094 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 BTN3A1O00481 513 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 TXNDC9O14530 226 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 DSCR3O14972 297 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 KPNA5O15131 536 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 PSMD3O43242 534 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 LRRTM2O43300 516 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 SRPX2O60687 465 aaPredicted RBP3.34□□□□□ -1.87
XRN1-209ENST00000472625 TJP3O95049 919 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CCNDBP1O95273 360 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 AP2A1O95782 977 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CLDN1O95832 211 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 HPP00738 406 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 APOA4P06727 396 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CAPN1P07384 714 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 STSP08842 583 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CHRM5P08912 532 aaPredicted RBP3.34□□□□□ -1.87
XRN1-209ENST00000472625 SBK3P0C264 359 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 COX6B1P14854 86 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 ST6GAL1P15907 406 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 UGT2B7P16662 529 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 SLC6A2P23975 617 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CXCR2P25025 360 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 SSTR2P30874 369 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CDKN2BP42772 138 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 LMAN1P49257 510 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 ZNF140P52738 457 aaPredicted RBP3.34□□□□□ -1.87
XRN1-209ENST00000472625 HADHBP55084 474 aaKnown RBP3.34□□□□□ -1.87
XRN1-209ENST00000472625 PPP1CAP62136 330 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 SKP1P63208 163 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 ARG2P78540 354 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 NHLH2Q02577 135 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 CACNG1Q06432 222 aa3.34□□□□□ -1.87
XRN1-209ENST00000472625 SLC10A2Q12908 348 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms