RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SMIM10Q96HG1 83 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 MCMBPQ9BTE3 642 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 HES7Q9BYE0 225 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 RHBGQ9H310 441 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 CDCP1Q9H5V8 836 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 POPDC3Q9HBV1 291 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 SMYD2Q9NRG4 433 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 COPG2Q9UBF2 871 aa21.15■□□□□ 0.98
C9orf3-213ENST00000471978 H2AFYO75367 372 aaKnown RBP21.14■□□□□ 0.97
C9orf3-213ENST00000471978 GNAZP19086 355 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 MAOAP21397 527 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 EEF1DP29692 281 aaKnown RBP21.14■□□□□ 0.97
C9orf3-213ENST00000471978 GDF5P43026 501 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 SLC12A2P55011 1212 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 OC90Q02509 493 aaPredicted RBP21.14■□□□□ 0.97
C9orf3-213ENST00000471978 RBPJQ06330 500 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 CBLBQ13191 982 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.14■□□□□ 0.97
C9orf3-213ENST00000471978 SLC34A3Q8N130 599 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 LGI4Q8N135 537 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 KIF2BQ8N4N8 673 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 HORMAD2Q8N7B1 307 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 BBOF1Q8ND07 529 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 PYROXD1Q8WU10 500 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 SCMH1Q96GD3 660 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 PRDM9Q9NQV7 894 aa21.14■□□□□ 0.97
C9orf3-213ENST00000471978 NCF1BA6NI72 391 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 NCF1CA8MVU1 366 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 C4orf51C9J302 202 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 FAM227AF5H4B4 570 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 WISP2O76076 250 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 C1GALT1C1LP0DN25 315 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 NCF1P14598 390 aaPredicted RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 SLC6A12P48065 614 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 POU4F1Q01851 419 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 ILF2Q12905 390 aaKnown RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 SLCO4C1Q6ZQN7 724 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 RPS19BP1Q86WX3 136 aaKnown RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 TMEM178AQ8NBL3 297 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 RHBDF1Q96CC6 855 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 UNKQ9C0B0 810 aaKnown RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 DERL2Q9GZP9 239 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 AICDAQ9GZX7 198 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 SUCOQ9UBS9 1254 aaKnown RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 PYCARDQ9ULZ3 195 aa21.13■□□□□ 0.97
C9orf3-213ENST00000471978 MTO1Q9Y2Z2 717 aaKnown RBP21.13■□□□□ 0.97
C9orf3-213ENST00000471978 CREBBPQ92793 2442 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 TCRBV16S1A1N1A0A5B0 115 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 SAGE2PA6NJ88 616 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 CCL21O00585 134 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 CA7P43166 264 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 STXBP1P61764 594 aaKnown RBP21.12■□□□□ 0.97
C9orf3-213ENST00000471978 BTN3A2P78410 334 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 SLBPQ14493 270 aaKnown RBP eCLIP21.12■□□□□ 0.97
C9orf3-213ENST00000471978 TGFBIQ15582 683 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 TMIGD1Q6UXZ0 262 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 KLHDC8AQ8IYD2 350 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 CA13Q8N1Q1 262 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 SPATA6LQ8N4H0 392 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 ARMC2Q8NEN0 867 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 ANP32BQ92688 251 aaKnown RBP21.12■□□□□ 0.97
C9orf3-213ENST00000471978 FAR2Q96K12 515 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 DPH5Q9H2P9 285 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 CAB39LQ9H9S4 337 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 SAYSD1Q9NPB0 183 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 NECTIN3Q9NQS3 549 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 LRFN1Q9P244 771 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 SH3BGRL2Q9UJC5 107 aa21.12■□□□□ 0.97
C9orf3-213ENST00000471978 MYO7BQ6PIF6 2116 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 IGKV3D-11A0A0A0MRZ8 115 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 PRSS44E7EML9 344 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 FANCGO15287 622 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 NEURL1O76050 574 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 SP1P08047 785 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 TPP2P29144 1249 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-213ENST00000471978 SSTR1P30872 391 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 CALCOCO2Q13137 446 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 SP5Q6BEB4 398 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-213ENST00000471978 SLC25A25Q6KCM7 469 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 GALNTL5Q7Z4T8 443 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 TTLQ8NG68 377 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 CCT6BQ92526 530 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 CDKL2Q92772 493 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 GAL3ST3Q96A11 431 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 TSPAN17Q96FV3 270 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 CCDC120Q96HB5 630 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 ERP44Q9BS26 406 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 CAPS2Q9BXY5 557 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 WHRNQ9P202 907 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 TXNDC16Q9P2K2 825 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 ENTPD4Q9Y227 616 aa21.11■□□□□ 0.97
C9orf3-213ENST00000471978 ASPDHA6ND91 283 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 A8MUA0 341 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 CXorf49A8MYA2 514 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 CDK2AP1O14519 115 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 SLC19A2O60779 497 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 WISP3O95389 354 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-213ENST00000471978 MLYCDO95822 493 aa21.1■□□□□ 0.97
C9orf3-213ENST00000471978 CASP6P55212 293 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms