RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 WISP2O76076 250 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 SERPINA6P08185 405 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 SMIM10L1P0DMW3 83 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 HNF4AP41235 474 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 HNMTP50135 292 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 ST13P50502 369 aaKnown RBP16.39■□□□□ 0.21
COL7A1-208ENST00000470076 ARL4CP56559 192 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 RAB8AP61006 207 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 DR1Q01658 176 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 MGAT5Q09328 741 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 HYAL2Q12891 473 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 RBBP5Q15291 538 aaKnown RBP16.39■□□□□ 0.21
COL7A1-208ENST00000470076 C3AR1Q16581 482 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 ZC3HC1Q86WB0 502 aaKnown RBP16.39■□□□□ 0.21
COL7A1-208ENST00000470076 CYP4X1Q8N118 509 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 KIF2BQ8N4N8 673 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 ARMC2Q8NEN0 867 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 SMIM10Q96HG1 83 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 EGFL8Q99944 293 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 PRDM9Q9NQV7 894 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 DCHS2Q6V1P9 2916 aa16.39■□□□□ 0.21
COL7A1-208ENST00000470076 TACC2O95359 2948 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 FAM95CA0A1B0GW59 222 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 SAGE2PA6NJ88 616 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 NPIPA5E9PKD4 350 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 CDC7O00311 574 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 SLC25A12O75746 678 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 AGAP20933 346 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 SAT1P21673 171 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 HTR1EP28566 365 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 GRNP28799 593 aaKnown RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 TPP2P29144 1249 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 CYB561P49447 251 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 SMSP52788 366 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 BTG2P78543 158 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 MAPKAPK3Q16644 382 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 ZNF630Q2M218 657 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 Q6ZPB1 254 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 ADAMTSL2Q86TH1 951 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 KLHL7Q8IXQ5 586 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 TSPAN10Q9H1Z9 355 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 TRIM45Q9H8W5 580 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
COL7A1-208ENST00000470076 TINAGQ9UJW2 476 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 NPIPA1Q9UND3 350 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 OARD1Q9Y530 152 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 PSAT1Q9Y617 370 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 FBN2P35556 2912 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 OTOGQ6ZRI0 2925 aa16.38■□□□□ 0.21
COL7A1-208ENST00000470076 CTAGE15A4D2H0 777 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 NPEPPSL1A6NEC2 478 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ASNA1O43681 348 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 NME2P1O60361 137 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 SEC31AO94979 1220 aaKnown RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 GNAZP19086 355 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 MAOAP21397 527 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 NME2P22392 152 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 TRHRP34981 398 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 PTGER4P35408 488 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ITGA8P53708 1063 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 MLF1P58340 268 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 TAS2R39P59534 338 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 STXBP1P61764 594 aaKnown RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ILF2Q12905 390 aaKnown RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ZNF468Q5VIY5 522 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 FRA10AC1Q70Z53 315 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 CTAGE6Q86UF2 777 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ANKMY2Q8IV38 441 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 SIAH3Q8IW03 269 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 ARMC10Q8N2F6 343 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 NFAM1Q8NET5 270 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-208ENST00000470076 TTLQ8NG68 377 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 CREB3L4Q8TEY5 395 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 TMEM125Q96AQ2 219 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 VPS39Q96JC1 886 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 CAPZA3Q96KX2 299 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 RHBGQ9H310 441 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 KLHL31Q9H511 634 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 NSMCE4AQ9NXX6 385 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 MOCS1Q9NZB8 636 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 CTNNAL1Q9UBT7 734 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 MMACHCQ9Y4U1 282 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 CACNA1CQ13936 2221 aa16.37■□□□□ 0.21
COL7A1-208ENST00000470076 FCHO1O14526 889 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
COL7A1-208ENST00000470076 ZNF24P17028 368 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 GSTM2P28161 218 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 HLCSP50747 726 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 ADORA2A-AS1P86434 159 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 PDIA2Q13087 525 aaKnown RBP16.36■□□□□ 0.21
COL7A1-208ENST00000470076 ZNF460Q14592 562 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 TERF2Q15554 542 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 TOR1AIP1Q5JTV8 583 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 CREG2Q8IUH2 290 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 KLHDC8AQ8IYD2 350 aa16.36■□□□□ 0.21
COL7A1-208ENST00000470076 CA13Q8N1Q1 262 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms