RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ZNF395Q9H8N7 513 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 DEPPQ9NTK1 212 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 AMFRQ9UKV5 643 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 ZNF148Q9UQR1 794 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 FAM215AQ9Y5M1 114 aa17.67■□□□□ 0.42
NCKIPSD-209ENST00000470006 OR14I1A6ND48 311 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 A8MVJ9 347 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 PSMD12O00232 456 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 NDUFS4O43181 175 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 GALR3O60755 368 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 B3GALT4O96024 378 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 CYLC1P35663 651 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 ADH7P40394 386 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 PEX19P40855 299 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 TBPL1P62380 186 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 KLF1Q13351 362 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 QSOX2Q6ZRP7 698 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 RGS9BPQ6ZS82 235 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 UBE2R2Q712K3 238 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 CCDC89Q8N998 374 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 ZNF740Q8NDX6 193 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 NFAM1Q8NET5 270 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 ASB11Q8WXH4 323 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLCO2A1Q92959 643 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 LRRC46Q96FV0 321 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 TCF12Q99081 682 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 CCDC77Q9BR77 488 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 IL22Q9GZX6 179 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 EXO5Q9H790 373 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 NEUROD4Q9HD90 331 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 HPF1Q9NWY4 346 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 BFARQ9NZS9 450 aa17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 DRG1Q9Y295 367 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-209ENST00000470006 MPDZO75970 2070 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 PINLYPA6NC86 204 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 KIAA1324LA8MWY0 1029 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 FAM47E-STBD1D6RA91 191 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 G3V3Y1 287 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 MYO1DO94832 1006 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 CDH1P12830 882 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 ALOX12P18054 663 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 RPS6KA1Q15418 735 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 FLYWCH1Q4VC44 716 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 C1orf185Q5T7R7 199 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 RTL6Q6ICC9 239 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 IL20RBQ6UXL0 311 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 CHSY3Q70JA7 882 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 PEX26Q7Z412 305 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 MFSD9Q8NBP5 474 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 B3GNT7Q8NFL0 401 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 OR2M7Q8NG81 312 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 ASB15Q8WXK1 588 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 MFSD3Q96ES6 412 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 SLC30A3Q99726 388 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 TTTY12Q9BZ98 90 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 PRDM9Q9NQV7 894 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 PNO1Q9NRX1 252 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 PACSIN2Q9UNF0 486 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 SH2B3Q9UQQ2 575 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 LIPGQ9Y5X9 500 aa17.65■□□□□ 0.42
NCKIPSD-209ENST00000470006 CSPG4Q6UVK1 2322 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 OR1F1O43749 312 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 CEP104O60308 925 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 WDR1O75083 606 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ATE1O95260 518 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 HEXAP06865 529 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 MPC1LP0DKB6 136 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 SKIV2L2P42285 1042 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 NPY2RP49146 381 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 MAN2A2P49641 1150 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 CLCN7P51798 805 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ADARP55265 1226 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 WLSQ5T9L3 541 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 NIPAL1Q6NVV3 410 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 PRIMA1Q86XR5 153 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 SPNS2Q8IVW8 549 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ARMC10Q8N2F6 343 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 FAM222BQ8WU58 562 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 SARGQ9BW04 601 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 CCDC68Q9H2F9 335 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 ZDHHC11Q9H8X9 412 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 NECTIN3Q9NQS3 549 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 SAMD15Q9P1V8 674 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 B4GALT7Q9UBV7 327 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 CBLCQ9ULV8 474 aa17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 YARS2Q9Y2Z4 477 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 FN1P02751 2386 aaKnown RBP17.64■□□□□ 0.41
NCKIPSD-209ENST00000470006 EML6Q6ZMW3 1958 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 ATP6AP2A0A1C7CYW4 349 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 TCRBV16S1A1N1A0A5B0 115 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 CTAGE9A4FU28 777 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 FAM171A2A8MVW0 826 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 GFYI3L273 518 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 ATP6AP2O75787 350 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 MGAT1P26572 445 aa17.63■□□□□ 0.41
NCKIPSD-209ENST00000470006 ARNTP27540 789 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms