RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 DTWD1Q8N5C7 304 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.213e-10■■□□□ 12.3
COL27A1-203ENST00000468565 CTSFQ9UBX1 484 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 ZNF282Q9UDV7 671 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 MARCOQ9UEW3 520 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 IKZF3Q9UKT9 509 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 A0A096LPK6 155 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 GYG2O15488 501 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 P2RX6O15547 441 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 NPPBP16860 134 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 FBLP22087 321 aaKnown RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 FOXL2P58012 376 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 OCA2Q04671 838 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 FAM53BQ14153 422 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 ZXDCQ2QGD7 858 aaPredicted RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 CMC1Q7Z7K0 106 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 PLD3Q8IV08 490 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 TEX19Q8NA77 164 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 CLEC1AQ8NC01 280 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 FAM13CQ8NE31 585 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 PIWIL2Q8TC59 973 aaKnown RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 TSPAN17Q96FV3 270 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 RILPQ96NA2 401 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 TSNARE1Q96NA8 513 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 NMUR2Q9GZQ4 415 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 GPAMQ9HCL2 828 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 NOP53Q9NZM5 478 aaKnown RBP13.74□□□□□ -0.21
COL27A1-203ENST00000468565 SH2B3Q9UQQ2 575 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 ZNF451Q9Y4E5 1061 aa13.74□□□□□ -0.21
COL27A1-203ENST00000468565 KLHL41O60662 606 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 H2AFYO75367 372 aaKnown RBP13.73□□□□□ -0.21
COL27A1-203ENST00000468565 WISP3O95389 354 aaPredicted RBP13.73□□□□□ -0.21
COL27A1-203ENST00000468565 GRK3P35626 688 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 SLC12A2P55011 1212 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 SOX8P57073 446 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 CDKL1Q00532 357 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 TLE1Q04724 770 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 ZNF460Q14592 562 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 VN1R4Q7Z5H5 301 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 ADAMTSL2Q86TH1 951 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 LCA5Q86VQ0 697 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 CEP97Q8IW35 865 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 TMEM151BQ8IW70 566 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 ARHGAP24Q8N264 748 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 ABHD11Q8NFV4 315 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 STT3BQ8TCJ2 826 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 SARGQ9BW04 601 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 C20orf27Q9GZN8 174 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 DRC3Q9H069 523 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 SOX17Q9H6I2 414 aaPredicted RBP13.73□□□□□ -0.21
COL27A1-203ENST00000468565 GPR83Q9NYM4 423 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 OARD1Q9Y530 152 aa13.73□□□□□ -0.21
COL27A1-203ENST00000468565 NPEPPSL1A6NEC2 478 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 SOCS6O14544 535 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 FOXS1O43638 330 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ITM2AO43736 263 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 WISP1O95388 367 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 GUCA1CO95843 209 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 SERPINA6P08185 405 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ZGLP1P0C6A0 271 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 SLC26A3P40879 764 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ABCE1P61221 599 aaKnown RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 MCUR1Q96AQ8 359 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 MIEF2Q96C03 454 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 TM4SF19Q96DZ7 209 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 GPR22Q99680 433 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 SMAD5Q99717 465 aaKnown RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 HS3ST3B1Q9Y662 390 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CDC7O00311 574 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 LYPLA1O75608 230 aaPredicted RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 C2P06681 752 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ANXA5P08758 320 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CDH1P12830 882 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CCR8P51685 355 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 AMER3Q8N944 861 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CAMKVQ8NCB2 501 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 OR4K1Q8NGD4 311 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 RDH11Q8TC12 318 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 PYCR2Q96C36 320 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 MMABQ96EY8 250 aaPredicted RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 OR4K3Q96R72 315 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CRB3Q9BUF7 120 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 CADM1Q9BY67 442 aaKnown RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 TRIM4Q9C037 500 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ATP13A2Q9NQ11 1180 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 C14orf105Q9NVL8 296 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 ARMCX1Q9P291 453 aa13.72□□□□□ -0.21
COL27A1-203ENST00000468565 C5AR2Q9P296 337 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms