RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 GDF5P43026 501 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 SLC7A5Q01650 507 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 ZNF33BQ06732 778 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 SFT2D3Q587I9 215 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 SULT1C3Q6IMI6 304 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 H3F3CQ6NXT2 135 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 PAPD4Q6PIY7 484 aaKnown RBP17.96■□□□□ 0.47
COL7A1-207ENST00000467985 TMIGD1Q6UXZ0 262 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 CREB3L4Q8TEY5 395 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 UBXN10Q96LJ8 280 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 RBCK1Q9BYM8 510 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 NT5DC2Q9H857 520 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 WWOXQ9NZC7 414 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 ABI3Q9P2A4 366 aa17.96■□□□□ 0.47
COL7A1-207ENST00000467985 OR5H15A6NDH6 313 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 NCF1BA6NI72 391 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 A8MUI8 341 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 NCF1CA8MVU1 366 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 PSMD12O00232 456 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 PRMT3O60678 531 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 S100BP04271 92 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 RHOXF2BP0C7M4 288 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 SMIM10L1P0DMW3 83 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 NCF1P14598 390 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 CD1DP15813 335 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 HNF4AP41235 474 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 OR4D2P58180 307 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 RAB8AP61006 207 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 GUCY2DQ02846 1103 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 HYAL2Q12891 473 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 KBTBD12Q3ZCT8 623 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 QSOX2Q6ZRP7 698 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 SHISA5Q8N114 240 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 SPATA6LQ8N4H0 392 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 KIAA1191Q96A73 305 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 SMIM10Q96HG1 83 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 FAR2Q96K12 515 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 MAGEB10Q96LZ2 347 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-207ENST00000467985 RHOXF2Q9BQY4 288 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 KCNK13Q9HB14 408 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 MMP25Q9NPA2 562 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 OLAHQ9NV23 265 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 DNAJC11Q9NVH1 559 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 COPG2Q9UBF2 871 aa17.95■□□□□ 0.46
COL7A1-207ENST00000467985 CRYBG3Q68DQ2 2970 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 A0A088AWK7 358 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 CLGNO14967 610 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 STK16O75716 305 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 C1QAP02745 245 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 ZNF10P21506 573 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-207ENST00000467985 CRABP2P29373 138 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 OLR1P78380 273 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 SLBPQ14493 270 aaKnown RBP eCLIP17.94■□□□□ 0.46
COL7A1-207ENST00000467985 C18orf21Q32NC0 220 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-207ENST00000467985 TOR1AIP1Q5JTV8 583 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 ACER2Q5QJU3 275 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 ZDHHC24Q6UX98 284 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 PPM1NQ8N819 430 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 PDPRQ8NCN5 879 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 LRRN4CLQ8ND94 238 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 ARMC2Q8NEN0 867 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 FBF1Q8TES7 1133 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 GAL3ST3Q96A11 431 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 C5orf34Q96MH7 638 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 PTCHD1Q96NR3 888 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 SLX1AQ9BQ83 275 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 UNKQ9C0B0 810 aaKnown RBP17.94■□□□□ 0.46
COL7A1-207ENST00000467985 KLHL31Q9H511 634 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 CD274Q9NZQ7 290 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 RNF112Q9ULX5 631 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 NBPF19A0A087WUL8 3843 aa17.94■□□□□ 0.46
COL7A1-207ENST00000467985 SVILO95425 2214 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 WIPF3A6NGB9 483 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 ANKDD1BA6NHY2 528 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 E2F3O00716 465 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 CDK2AP1O14519 115 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 TAPBPO15533 448 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 PRAMEF2O60811 474 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 B4GALT2O60909 372 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 B3GALT4O96024 378 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 CRYABP02511 175 aaKnown RBP17.93■□□□□ 0.46
COL7A1-207ENST00000467985 TAS2R50P59544 299 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 SLMAPQ14BN4 828 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 OR4D1Q15615 310 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 PDK4Q16654 411 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 MEP1AQ16819 746 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 RAPH1Q70E73 1250 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 CCDC91Q7Z6B0 441 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 TBC1D1Q86TI0 1168 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-207ENST00000467985 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL7A1-207ENST00000467985 LGI4Q8N135 537 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 SLC5A8Q8N695 610 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 DNAJB8Q8NHS0 232 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 STAG3L4Q8TBR4 150 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 TSLPQ969D9 159 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 PTCD3Q96EY7 689 aaKnown RBP17.93■□□□□ 0.46
COL7A1-207ENST00000467985 TMEM79Q9BSE2 394 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 EFCAB11Q9BUY7 163 aa17.93■□□□□ 0.46
COL7A1-207ENST00000467985 NPLQ9BXD5 320 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-207ENST00000467985 NMRAL1Q9HBL8 299 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms