RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ZNF648Q5T619 568 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 SERPINA13PQ6UXR4 307 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF517Q6ZMY9 492 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 DCAF4L2Q8NA75 395 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 SETD6Q8TBK2 473 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 VOPP1Q96AW1 172 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 FAM129BQ96TA1 746 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ASPNQ9BXN1 380 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ACER3Q9NUN7 267 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 FTSJ1Q9UET6 329 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 TMPRSS11EQ9UL52 423 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 E7EQ34 232 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 UGT2B17O75795 530 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CD72P21854 359 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 LIMS1P48059 325 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 DGKEP52429 567 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 FOXD4Q12950 439 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 DOC2AQ14183 400 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CDK10Q15131 360 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF385BQ569K4 471 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 LIPJQ5W064 366 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 PLAG1Q6DJT9 500 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 RNF130Q86XS8 419 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 C2orf15Q8WU43 125 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 TCF25Q9BQ70 676 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 CNOT2Q9NZN8 540 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 PCDHGB2Q9Y5G2 931 aa12.47□□□□□ -0.41
PDZRN3-205ENST00000466780 IGLV3-16A0A075B6K0 115 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CENPBD1B2RD01 187 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CCNB2O95067 398 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 SLC10A3P09131 477 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CBLP22681 906 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CHMP24386 653 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 TGM4P49221 684 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 ANGPTL8Q6UXH0 198 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CAMKMTQ7Z624 323 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 OR4A15Q8NGL6 344 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 COQ8BQ96D53 544 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 GDF15Q99988 308 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 DYRK4Q9NR20 520 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 THSD1Q9NS62 852 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 ZAR1LA6NP61 321 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CENPXA8MT69 81 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 A8MVJ9 347 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 RGS5O15539 181 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 OR56A5P0C7T3 313 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 MPC1LP0DKB6 136 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 AZGP1P25311 298 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CNR2P34972 360 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 SOX3P41225 446 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 XCR1P46094 333 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 SLAMF1Q13291 335 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 CDH18Q13634 790 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 KLHL17Q6TDP4 642 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 RAB43Q86YS6 212 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 LAX1Q8IWV1 398 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 OVCA2Q8WZ82 227 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF556Q9HAH1 456 aa12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 EXOSC4Q9NPD3 245 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-205ENST00000466780 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 SH3D21A4FU49 640 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 PRAMEF10O60809 474 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 SOCS5O75159 536 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 CYP2A7P20853 494 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 LHCGRP22888 699 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 HNF4AP41235 474 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 ACLYP53396 1101 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 CDC42P60953 191 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 HBA1P69905 142 aa12.46□□□□□ -0.42
PDZRN3-205ENST00000466780 NKX3-2P78367 333 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms