RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ZXDCQ2QGD7 858 aaPredicted RBP12.98□□□□□ -0.33
RPP40-203ENST00000464646 C18orf21Q32NC0 220 aaPredicted RBP12.98□□□□□ -0.33
RPP40-203ENST00000464646 SLC25A25Q6KCM7 469 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 SBSNQ6UWP8 590 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.98□□□□□ -0.33
RPP40-203ENST00000464646 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 SNX31Q8N9S9 440 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 OR4K1Q8NGD4 311 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 NT5CQ8TCD5 201 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 SREK1Q8WXA9 508 aaKnown RBP12.98□□□□□ -0.33
RPP40-203ENST00000464646 SLCO2A1Q92959 643 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 EXT2Q93063 718 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 TMEM125Q96AQ2 219 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 CCDC120Q96HB5 630 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 DEFB126Q9BYW3 111 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 FBXW2Q9UKT8 454 aa12.98□□□□□ -0.33
RPP40-203ENST00000464646 ANKDD1BA6NHY2 528 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 CCDC188H7C350 402 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 FCHO1O14526 889 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 SLC19A2O60779 497 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 PIAS1O75925 651 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
RPP40-203ENST00000464646 GDF5P43026 501 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 TAS2R39P59534 338 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
RPP40-203ENST00000464646 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 SLBPQ14493 270 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPP40-203ENST00000464646 TSNQ15631 228 aaKnown RBP12.97□□□□□ -0.33
RPP40-203ENST00000464646 FBXO48Q5FWF7 155 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 STEAP4Q687X5 459 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 MTFR2Q6P444 385 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 ADAMTSL2Q86TH1 951 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 ZC3HC1Q86WB0 502 aaKnown RBP12.97□□□□□ -0.33
RPP40-203ENST00000464646 KRT78Q8N1N4 520 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 SPATA6LQ8N4H0 392 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 AFAP1L2Q8N4X5 818 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 ANKRD53Q8N9V6 530 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 PYROXD1Q8WU10 500 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 CDKL2Q92772 493 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 RELTQ969Z4 430 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 COPS7BQ9H9Q2 264 aaPredicted RBP12.97□□□□□ -0.33
RPP40-203ENST00000464646 SAYSD1Q9NPB0 183 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 NSMCE4AQ9NXX6 385 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 TINAGQ9UJW2 476 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 OARD1Q9Y530 152 aa12.97□□□□□ -0.33
RPP40-203ENST00000464646 ZNHIT1O43257 154 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
RPP40-203ENST00000464646 SLC25A12O75746 678 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 S100BP04271 92 aaPredicted RBP12.96□□□□□ -0.33
RPP40-203ENST00000464646 SP1P08047 785 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 C1GALT1C1LP0DN25 315 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 GNAZP19086 355 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 TPP2P29144 1249 aaPredicted RBP12.96□□□□□ -0.33
RPP40-203ENST00000464646 CA7P43166 264 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 CYB561P49447 251 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 HNMTP50135 292 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 SLC13A2Q13183 592 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 C3AR1Q16581 482 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.96□□□□□ -0.33
RPP40-203ENST00000464646 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 CREG2Q8IUH2 290 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPP40-203ENST00000464646 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 TMEM156Q8N614 296 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 BBOF1Q8ND07 529 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 PDLIM5Q96HC4 596 aaKnown RBP12.96□□□□□ -0.33
RPP40-203ENST00000464646 NPAS2Q99743 824 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 WDR83Q9BRX9 315 aaKnown RBP12.96□□□□□ -0.33
RPP40-203ENST00000464646 CAB39LQ9H9S4 337 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 NECTIN3Q9NQS3 549 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 PRDM9Q9NQV7 894 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 PRTFDC1Q9NRG1 225 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 CD274Q9NZQ7 290 aa12.96□□□□□ -0.33
RPP40-203ENST00000464646 A0A088AWK7 358 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 TRBV11-1A0A0K0K1C0 115 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 MYOCOSA0A1B0GUC4 107 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CTAGE15A4D2H0 777 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CLDN4O14493 209 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 B3GALT2O43825 422 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPP40-203ENST00000464646 WISP2O76076 250 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 MYO1DO94832 1006 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 IFNA16P05015 189 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 SERPINA6P08185 405 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 ZNF10P21506 573 aaPredicted RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 HTR1EP28566 365 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 RPL21P46778 160 aaKnown RBP12.95□□□□□ -0.34
RPP40-203ENST00000464646 SMSP52788 366 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 PLA2G16P53816 162 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 TMIGD1Q6UXZ0 262 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CLNKQ7Z7G1 428 aa12.95□□□□□ -0.34
RPP40-203ENST00000464646 CTAGE6Q86UF2 777 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms