RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TMEM79Q9BSE2 394 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 TXLNGYQ9BZA5 131 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 ZNF700Q9H0M5 742 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 SPNS1Q9H2V7 528 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 EPB41L4BQ9H329 900 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 ACSS3Q9H6R3 686 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 C14orf105Q9NVL8 296 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 RIC8BQ9NVN3 520 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 ARL15Q9NXU5 204 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 UTP6Q9NYH9 597 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 TRPC4Q9UBN4 977 aa7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 MTRF1LQ9UGC7 380 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 ANKHD1Q8IWZ3 2542 aaKnown RBP7.48□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR5H15A6NDH6 313 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 H7BY64 318 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 C19orf84I3L1E1 186 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CCL21O00585 134 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 TAPBPO15533 448 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 LCMT2O60294 686 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRAMEF2O60811 474 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 RASAL1O95294 804 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 ACSL3O95573 720 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 GUCA1CO95843 209 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 STATHP02808 62 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 ALDOAP04075 364 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SNRPB2P08579 225 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 FAM153BP0C7A2 387 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 RHOXF2BP0C7M4 288 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 MYBL2P10244 700 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CCND1P24385 295 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 HTR1EP28566 365 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 GCAP28676 217 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 BCL6P41182 706 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 MAGEA12P43365 314 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 MAT1AQ00266 395 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 REEP5Q00765 189 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 IRF9Q00978 393 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CSHL1Q14406 222 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SLMAPQ14BN4 828 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 FAM153CQ494X1 144 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CATSPEREQ5SY80 951 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 THEMIS2Q5TEJ8 643 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CAPN13Q6MZZ7 669 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 RPTNQ6XPR3 784 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 LANCL3Q6ZV70 420 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRSS41Q7RTY9 318 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 C17orf64Q86WR6 236 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 GSPT2Q8IYD1 628 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CSNK1A1LQ8N752 337 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PDPRQ8NCN5 879 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 ABHD11Q8NFV4 315 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 OR4K1Q8NGD4 311 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 DNAJB8Q8NHS0 232 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 NEIL2Q969S2 332 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 ISL2Q96A47 359 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 KIAA1191Q96A73 305 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 RHBDF1Q96CC6 855 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 TSPAN17Q96FV3 270 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRAP1Q96NZ9 151 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 NPAS2Q99743 824 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 RHOXF2Q9BQY4 288 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SARGQ9BW04 601 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PCBD2Q9H0N5 130 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 MKKSQ9NPJ1 570 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 IGSF5Q9NSI5 407 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 TMEM184CQ9NVA4 438 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 TXNDC16Q9P2K2 825 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SUCOQ9UBS9 1254 aaKnown RBP7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 CTNNAL1Q9UBT7 734 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SEC14L3Q9UDX4 400 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 NFU1Q9UMS0 254 aa7.47□□□□□ -1.21
CDC42BPA-210ENST00000462553 PRRC2AP48634 2157 aaKnown RBP7.46□□□□□ -1.21
CDC42BPA-210ENST00000462553 KCNE1BA0A087WTH5 132 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 A0A0A6YYC8 382 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 IGHV3-20A0A0C4DH32 117 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 FEZF1A0PJY2 475 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 I3L1I5 382 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 PRPF4O43172 522 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MAN1A2O60476 641 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC19A2O60779 497 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 PRAMEF4O60810 478 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 KRT38O76015 456 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SEC24DO94855 1032 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HEXBP07686 556 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ABHD2P08910 425 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HIST1H2AGP0C0S8 130 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HIST1H2ADP20671 130 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HRH2P25021 359 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 PHBP35232 272 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 KCNC1P48547 511 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC12A2P55011 1212 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 KRTAP10-9P60411 292 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ATP6V0D1P61421 351 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MEF2AQ02078 507 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF33BQ06732 778 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TESK1Q15569 626 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TGFBIQ15582 683 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 C3AR1Q16581 482 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms