RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 OPALINQ96PE5 141 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 TRNT1Q96Q11 434 aaKnown RBP17.71■□□□□ 0.43
HPS3-204ENST00000462030 C19orf43Q9BQ61 176 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 ZNF556Q9HAH1 456 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 TRAPPC4Q9Y296 219 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 A0A075B6Q4 140 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 LINC00854A0A1B0GVQ3 168 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 EIF3FO00303 357 aaPredicted RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 SOCS5O75159 536 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 ZNF821O75541 412 aaPredicted RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 SLC10A3P09131 477 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 LHCGRP22888 699 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 OR1D2P34982 312 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 RPS19P39019 145 aaKnown RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 FKBP1BP68106 108 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 MRPS15P82914 257 aaKnown RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 BAK1Q16611 211 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 ZFP69Q49AA0 526 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 LRRC73Q5JTD7 316 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 VPS37AQ8NEZ2 397 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 OR4K1Q8NGD4 311 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 ASB15Q8WXK1 588 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 OVCA2Q8WZ82 227 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 TMCO6Q96DC7 493 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 SNX18Q96RF0 628 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 SLC22A12Q96S37 553 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 ASPNQ9BXN1 380 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 TMEM161AQ9NX61 479 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 CRNNQ9UBG3 495 aaPredicted RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 ACSL6Q9UKU0 697 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 V9GYH0 126 aa17.71■□□□□ 0.42
HPS3-204ENST00000462030 HELZP42694 1942 aaKnown RBP17.71■□□□□ 0.42
HPS3-204ENST00000462030 CCDC88CQ9P219 2028 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 EFCAB10A6NFE3 127 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 BNIP3LO60238 219 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CCNB2O95067 398 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 C1SP09871 688 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 MPC1LP0DKB6 136 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 TIE1P35590 1138 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 SOX3P41225 446 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CDC42P60953 191 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 PTSQ03393 145 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 SCARB2Q14108 478 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CCSAPQ6IQ19 270 aaPredicted RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 HJURPQ8NCD3 748 aaPredicted RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 FLCNQ8NFG4 579 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 ST13P5Q8NFI4 369 aaPredicted RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 CASD1Q96PB1 797 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 TMEM121BQ9BXQ6 578 aaPredicted RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 HHATLQ9HCP6 504 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 ACER3Q9NUN7 267 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 RHCGQ9UBD6 479 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CD84Q9UIB8 345 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 EXO1Q9UQ84 846 aaKnown RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 IGLV3-16A0A075B6K0 115 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 FAM227AF5H4B4 570 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 NDUFB5O43674 189 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 TNFRSF21O75509 655 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CNR2P34972 360 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 TGM4P49221 684 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 HBA1P69905 142 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 DGKKQ5KSL6 1271 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 MFSD14CQ5VZR4 134 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 RETSATQ6NUM9 610 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 PTCHD4Q6ZW05 846 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 THOC6Q86W42 341 aaKnown RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 LAX1Q8IWV1 398 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 CACTIN-AS1Q8N1I8 211 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 ASCC1Q8N9N2 400 aaKnown RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 FOXJ1Q92949 421 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 SGK2Q9HBY8 427 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 TBC1D14Q9P2M4 693 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 ZNF282Q9UDV7 671 aaPredicted RBP17.7■□□□□ 0.42
HPS3-204ENST00000462030 FTSJ1Q9UET6 329 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 STOML2Q9UJZ1 356 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 AP1M2Q9Y6Q5 423 aa17.7■□□□□ 0.42
HPS3-204ENST00000462030 PRAMEF33A0A0G2JMD5 474 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 PRAMEF10O60809 474 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CKMT1AP12532 417 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CD72P21854 359 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
HPS3-204ENST00000462030 ZNF79Q15937 498 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 ANXA8L1Q5VT79 327 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 PLAG1Q6DJT9 500 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 KLHL17Q6TDP4 642 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 NLRP8Q86W28 1048 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 AQP11Q8NBQ7 271 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CHTF18Q8WVB6 975 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 VOPP1Q96AW1 172 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 TRMT61AQ96FX7 289 aaKnown RBP17.69■□□□□ 0.42
HPS3-204ENST00000462030 C2orf49Q9BVC5 232 aaPredicted RBP17.69■□□□□ 0.42
HPS3-204ENST00000462030 DYRK4Q9NR20 520 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 THSD1Q9NS62 852 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CNOT2Q9NZN8 540 aaKnown RBP17.69■□□□□ 0.42
HPS3-204ENST00000462030 CLEC4EQ9ULY5 219 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 GRIP1Q9Y3R0 1128 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 GNG14A0A1W2PPG7 69 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 MGAT4DA6NG13 374 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CBLP22681 906 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CHMP24386 653 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms