RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 KRT12Q99456 494 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 DERL2Q9GZP9 239 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 SNX24Q9Y343 169 aa21.37■■□□□ 1.01
PTPN4-207ENST00000460162 IGKV3D-11A0A0A0MRZ8 115 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 TRGV8A0A0C4DH27 118 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 TCRBV16S1A1N1A0A5B0 115 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 ASPDHA6ND91 283 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 SAGE2PA6NJ88 616 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 MAN1A2O60476 641 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 WDR47O94967 919 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 EEF1DP29692 281 aaKnown RBP21.36■■□□□ 1.01
PTPN4-207ENST00000460162 CD96P40200 585 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 HNF4AP41235 474 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 CA7P43166 264 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 SLC12A2P55011 1212 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 STXBP1P61764 594 aaKnown RBP21.36■■□□□ 1.01
PTPN4-207ENST00000460162 POU4F1Q01851 419 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 TOR1AIP1Q5JTV8 583 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 MTFR2Q6P444 385 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.36■■□□□ 1.01
PTPN4-207ENST00000460162 GAL3ST3Q96A11 431 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 RHBDF1Q96CC6 855 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 SEC16BQ96JE7 1060 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 PRDM9Q9NQV7 894 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 ANKRD10Q9NXR5 420 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 ENTPD4Q9Y227 616 aa21.36■■□□□ 1.01
PTPN4-207ENST00000460162 C4orf51C9J302 202 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 WISP3O95389 354 aaPredicted RBP21.35■■□□□ 1.01
PTPN4-207ENST00000460162 OC90Q02509 493 aaPredicted RBP21.35■■□□□ 1.01
PTPN4-207ENST00000460162 SLCO4C1Q6ZQN7 724 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 TICAM1Q8IUC6 712 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 TCAIMQ8N3R3 496 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 FAM98AQ8NCA5 519 aaKnown RBP21.35■■□□□ 1.01
PTPN4-207ENST00000460162 ARMC2Q8NEN0 867 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 PYROXD1Q8WU10 500 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 CDKL2Q92772 493 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 TSPAN17Q96FV3 270 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 KLHL31Q9H511 634 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 KLHL1Q9NR64 748 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 SMYD2Q9NRG4 433 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 GPRC5BQ9NZH0 403 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 COPG2Q9UBF2 871 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 MMACHCQ9Y4U1 282 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 MYO7BQ6PIF6 2116 aa21.35■■□□□ 1.01
PTPN4-207ENST00000460162 EIF3HO15372 352 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 NEURL1O76050 574 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 C1GALT1C1LP0DN25 315 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 MAOAP21397 527 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 BTG2P78543 158 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 CALCOCO2Q13137 446 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 SLBPQ14493 270 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 TGFBIQ15582 683 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 SPINK14Q6IE38 97 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 TMIGD1Q6UXZ0 262 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 CAPN12Q6ZSI9 719 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 RPS19BP1Q86WX3 136 aaKnown RBP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 CA13Q8N1Q1 262 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 KIF2BQ8N4N8 673 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 THAP3Q8WTV1 239 aaPredicted RBP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 ANP32BQ92688 251 aaKnown RBP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 FRMD6Q96NE9 622 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 HES7Q9BYE0 225 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 PITHD1Q9GZP4 211 aaPredicted RBP21.34■■□□□ 1.01
PTPN4-207ENST00000460162 AICDAQ9GZX7 198 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 WHRNQ9P202 907 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 LRFN1Q9P244 771 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 TXNDC16Q9P2K2 825 aa21.34■■□□□ 1.01
PTPN4-207ENST00000460162 FAM187AA6NFU0 413 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 FANCGO15287 622 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 HNRNPRO43390 633 aaKnown RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 SLC19A2O60779 497 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 H2AFYO75367 372 aaKnown RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 HPDP32754 393 aaPredicted RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 GDF5P43026 501 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CASP6P55212 293 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 SRSF11Q05519 484 aaKnown RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 TERF2Q15554 542 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 RPTNQ6XPR3 784 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CYP4X1Q8N118 509 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 KRT78Q8N1N4 520 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 ITLN2Q8WWU7 325 aaPredicted RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CCDC120Q96HB5 630 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 PDLIM2Q96JY6 352 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 FAR2Q96K12 515 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 GPR137Q96N19 417 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CAPS2Q9BXY5 557 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CDCP1Q9H5V8 836 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 CNOT10Q9H9A5 744 aaKnown RBP21.33■■□□□ 1.01
PTPN4-207ENST00000460162 WWOXQ9NZC7 414 aa21.33■■□□□ 1.01
PTPN4-207ENST00000460162 LRBAP50851 2863 aa21.33■■□□□ 1
PTPN4-207ENST00000460162 ABCA12Q86UK0 2595 aa21.33■■□□□ 1
PTPN4-207ENST00000460162 A0A088AWK7 358 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 NCF1BA6NI72 391 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 NCF1CA8MVU1 366 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 PRSS44E7EML9 344 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 CCL21O00585 134 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 SP1P08047 785 aa21.32■■□□□ 1
PTPN4-207ENST00000460162 NCF1P14598 390 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 ZNF10P21506 573 aaPredicted RBP21.32■■□□□ 1
PTPN4-207ENST00000460162 TPP2P29144 1249 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms