RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CPXM1Q96SM3 734 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 PBDC1Q9BVG4 233 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 FAM120CQ9NX05 1096 aaKnown RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 FZD10Q9ULW2 581 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 PCDHB14Q9Y5E9 798 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 TPST2O60704 377 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 IRF5Q13568 498 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 RAB31Q13636 194 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM35AQ53FP2 167 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 TNFAIP8L2Q6P589 184 aaPredicted RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 GDPD4Q6W3E5 623 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 ZNF517Q6ZMY9 492 aaPredicted RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 PLEKHG7Q6ZR37 379 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 ERN2Q76MJ5 926 aaKnown RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 KREMEN2Q8NCW0 462 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 COPS5Q92905 334 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 ZUFSPQ96AP4 578 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 STXBP5LQ9Y2K9 1186 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 ACOT7O00154 380 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 C8AP07357 584 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 PFKMP08237 780 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 ETV6P41212 452 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 RIDAP52758 137 aaKnown RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 MLLT6P55198 1093 aaPredicted RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 CLEC6AQ6EIG7 209 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 C2orf73Q8N5S3 287 aaPredicted RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 C7orf50Q9BRJ6 194 aaKnown RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 PREBQ9HCU5 417 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 POMPQ9Y244 141 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 CPQQ9Y646 472 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
SHROOM4-203ENST00000460112 TDRD6O60522 2096 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SULT1B1O43704 296 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FLT3LGP49771 235 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ATP4BP51164 291 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SLBPQ14493 270 aaKnown RBP eCLIP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CHPT1Q8WUD6 406 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 HERC2P3Q9BVR0 1158 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 PDE7BQ9NP56 450 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CENPMQ9NSP4 180 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ABCB8Q9NUT2 735 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC17A7Q9P2U7 560 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FXYD6-FXYD2A0A087WZ82 144 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CLCA1A8K7I4 914 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 HPRP00739 348 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SPARCP09486 303 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 GABARAPL2P60520 117 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ELOCQ15369 112 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 VRK1Q99986 396 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TCEAL7Q9BRU2 100 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FBXW11Q9UKB1 542 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FZD4Q9ULV1 537 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 RGPD5Q99666 1765 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC31A1O15431 190 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ERI3O43414 337 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 DIRAS3O95661 229 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TIGD5Q53EQ6 642 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 KCTD18Q6PI47 426 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ANKRD46Q86W74 232 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM139Q8IV31 216 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 BANPQ8N9N5 519 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC45A3Q96JT2 553 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 MEPEQ9NQ76 525 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 RIMKLBQ9ULI2 386 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 BCAS2O75934 225 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC16A8O95907 504 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 IFNA10P01566 189 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 EPOP01588 193 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CD3GP09693 182 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 NUDT7P0C024 238 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 RAC2P15153 192 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 PORP16435 677 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 DGKEP52429 567 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 GSTM4Q03013 218 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CARTPTQ16568 116 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 FAM86C1Q9NVL1 165 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 PTTG3PQ9NZH4 202 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 PADI3Q9ULW8 664 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CMAHPQ9Y471 501 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM14AQ9Y6G1 99 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CRYZL1O95825 349 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 LATS1O95835 1130 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ITGB1P05556 798 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 GLDCP23378 1020 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 CDKN1CP49918 316 aaPredicted RBP8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TAS2R40P59535 323 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ECH1Q13011 328 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 TPRG1LQ5T0D9 272 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 KIAA1161Q6NSJ0 714 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
SHROOM4-203ENST00000460112 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms