RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SMIM10L1P0DMW3 83 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 IL10P22301 178 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 HNRNPH1P31943 449 aaKnown RBP19.58■□□□□ 0.72
VARS-218ENST00000459667 PCBP2Q15366 365 aaKnown RBP eCLIP19.58■□□□□ 0.72
VARS-218ENST00000459667 COLEC12Q5KU26 742 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 IRAK1BP1Q5VVH5 260 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 EMBQ6PCB8 327 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 TMEM205Q6UW68 189 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 TIFABQ6ZNK6 161 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 NDUFAF7Q7L592 441 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 VN1R5Q7Z5H4 357 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 PTGR2Q8N8N7 351 aaPredicted RBP19.58■□□□□ 0.72
VARS-218ENST00000459667 UBE2E3Q969T4 207 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 SMIM10Q96HG1 83 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 ZNF552Q9H707 407 aaPredicted RBP19.58■□□□□ 0.72
VARS-218ENST00000459667 TMCO1Q9UM00 188 aa19.58■□□□□ 0.72
VARS-218ENST00000459667 TNPO3Q9Y5L0 923 aaKnown RBP19.58■□□□□ 0.72
VARS-218ENST00000459667 LOC102723996A0A087X1L8 192 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 IGHV1-45A0A0A0MS14 117 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 A0A1W2PQ72 361 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 LRIT2A6NDA9 550 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 ERI3O43414 337 aaKnown RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 DPM1O60762 260 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 DNAJB6O75190 326 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 SMIM24O75264 130 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 CDC123O75794 336 aaPredicted RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 HPDP32754 393 aaPredicted RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 CASRP41180 1078 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 PCDH1Q08174 1060 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 ERCC6LQ2NKX8 1250 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 HPS6Q86YV9 775 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 MS4A6EQ96DS6 147 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 PHF21BQ96EK2 531 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 FAR2Q96K12 515 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 MRPL57Q9BQC6 102 aaKnown RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 MRPL46Q9H2W6 279 aaKnown RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 RHBGQ9H310 441 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 CLK4Q9HAZ1 481 aaKnown RBP19.57■□□□□ 0.72
VARS-218ENST00000459667 PRM3Q9NNZ6 103 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 RIC8BQ9NVN3 520 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 C5AR2Q9P296 337 aa19.57■□□□□ 0.72
VARS-218ENST00000459667 A0A0G2JN53 185 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 OR2W5A6NFC9 320 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 SIX3O95343 332 aaPredicted RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 TBX6O95947 436 aaPredicted RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 TUBBP07437 444 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 FHP07954 510 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 EEF1DP29692 281 aaKnown RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 PIK3CGP48736 1102 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 BTN3A2P78410 334 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 Q0VFX4 171 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 GTF2H2Q13888 395 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 PCOLCEQ15113 449 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 ADPRMQ3LIE5 342 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 GRHL2Q6ISB3 625 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 GTF2H2CQ6P1K8 395 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 METTL2BQ6P1Q9 378 aaKnown RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 MED27Q6P2C8 311 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 LANCL3Q6ZV70 420 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 GOLGA7Q7Z5G4 137 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 MYLK4Q86YV6 388 aaPredicted RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 LAS2Q8IYD9 372 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 OR2L5Q8NG80 312 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 TBC1D20Q96BZ9 403 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 THOC3Q96J01 351 aaKnown RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 REXO4Q9GZR2 422 aaKnown RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 LHPPQ9H008 270 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 EPN3Q9H201 632 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 LANCL2Q9NS86 450 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 C19orf25Q9UFG5 118 aaPredicted RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 TBK1Q9UHD2 729 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 FASNP49327 2511 aaKnown RBP19.56■□□□□ 0.72
VARS-218ENST00000459667 DOCK10Q96BY6 2186 aa19.56■□□□□ 0.72
VARS-218ENST00000459667 A0A088AWK7 358 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 PCNAP12004 261 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 ZNF10P21506 573 aaPredicted RBP19.55■□□□□ 0.72
VARS-218ENST00000459667 JAK1P23458 1154 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 PLA2G16P53816 162 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 TRIM40Q6P9F5 258 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 KBTBD2Q8IY47 623 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 CA13Q8N1Q1 262 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 TRIM4Q9C037 500 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 ZNF700Q9H0M5 742 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 IPPKQ9H8X2 491 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 ACTR8Q9H981 624 aa19.55■□□□□ 0.72
VARS-218ENST00000459667 STX16-NPEPL1H3BU86 382 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 J3QKU1 62 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 PSMD12O00232 456 aaPredicted RBP19.54■□□□□ 0.72
VARS-218ENST00000459667 E2F3O00716 465 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 STX16O14662 325 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 SHBGP04278 402 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 RNH1P13489 461 aaKnown RBP19.54■□□□□ 0.72
VARS-218ENST00000459667 SERPINB1P30740 379 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 HSD17B3P37058 310 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 RHAGQ02094 409 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 TLE1Q04724 770 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 NADK2Q4G0N4 442 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 AGAP7PQ5VUJ5 663 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 LIPJQ5W064 366 aa19.54■□□□□ 0.72
VARS-218ENST00000459667 CPEB2Q7Z5Q1 589 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms