RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 CHTF18Q8WVB6 975 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 TMEM169Q96HH4 297 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 MS4A12Q9NXJ0 267 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 SPASTQ9UBP0 616 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
SCFD1-203ENST00000458591 CFAP20Q9Y6A4 193 aaKnown RBP13.58□□□□□ -0.24
SCFD1-203ENST00000458591 DOCK6Q96HP0 2047 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 NPC1O15118 1278 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 GABRB1P18505 474 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 WEE1P30291 646 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 AP1S2P56377 157 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 LEXMQ3ZCV2 418 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 ARSIQ5FYB1 569 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 TPRG1LQ5T0D9 272 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 DEPDC1Q5TB30 811 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 GRHL2Q6ISB3 625 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 GDPD4Q6W3E5 623 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 HEATR4Q86WZ0 1026 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 RNF130Q86XS8 419 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 PARP16Q8N5Y8 322 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF740Q8NDX6 193 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 OR2A12Q8NGT7 310 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 ASZ1Q8WWH4 475 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SLC35A5Q9BS91 424 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 RSPO3Q9BXY4 272 aaPredicted RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 LINC00597Q9H2U6 94 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 HCFC1R1Q9NWW0 138 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 KLHL42Q9P2K6 505 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 PADI2Q9Y2J8 665 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF106Q9H2Y7 1883 aaKnown RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SERTM1A2A2V5 107 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 LEFTY1O75610 366 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SLCO2B1O94956 709 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 OXSR1O95747 527 aaPredicted RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 GSTM1P09488 218 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 POU1F1P28069 291 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 PCGF2P35227 344 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 CCR2P41597 374 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 RPS26P62854 115 aaKnown RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 TUBA1BP68363 451 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 ELP6Q0PNE2 266 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SCARB2Q14108 478 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SYTL3Q4VX76 610 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 TUBA3EQ6PEY2 450 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 TUBA1AQ71U36 451 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 STX19Q8N4C7 294 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 B3GNT7Q8NFL0 401 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 MRPS31Q92665 395 aaKnown RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
SCFD1-203ENST00000458591 KCNS3Q9BQ31 491 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 BTNL2Q9UIR0 455 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
SCFD1-203ENST00000458591 H0YIV9 168 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 SLC16A5O15375 505 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 PRMT3O60678 531 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 PSIP1O75475 530 aaKnown RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TNFRSF21O75509 655 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 CTSAP10619 480 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 ALOX12P18054 663 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 NR4A2P43354 598 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 METAP1P53582 386 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 PTPN5P54829 565 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 SP140Q13342 867 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 SLC5A12Q1EHB4 618 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF181Q2M3W8 571 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TTC23LQ6PF05 361 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF605Q86T29 641 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 AKAP14Q86UN6 197 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TCEAL8Q8IYN2 117 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 CYP4Z2PQ8N1L4 340 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 ZNF513Q8N8E2 541 aaPredicted RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 FCGR1BQ92637 280 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 COQ8BQ96D53 544 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
SCFD1-203ENST00000458591 GULP1Q9UBP9 304 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 CTDSP2O14595 271 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 GASTP01350 101 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 URODP06132 367 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 CTSLP07711 333 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 TIA1P31483 386 aaKnown RBP eCLIP13.56□□□□□ -0.244e-8■■□□□ 11.9
SCFD1-203ENST00000458591 MED22Q15528 200 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 MICAQ29983 383 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 DESI1Q6ICB0 168 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 RASGRP3Q8IV61 690 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 CELF2-AS1Q8N7Q2 184 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 KIAA1958Q8N8K9 716 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 MMP27Q9H306 513 aa13.56□□□□□ -0.24
SCFD1-203ENST00000458591 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms