RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PCDHB14Q9Y5E9 798 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TRIOBPQ9H2D6 2365 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 EML5Q05BV3 1969 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 A0A0A6YYD5 115 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 C1orf226A1L170 272 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GABRR3A8MPY1 467 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 H7BY64 318 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PLPP1O14494 284 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ARPC2O15144 300 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SRPX2O60687 465 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 IFNA14P01570 189 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC35G6P0C7Q6 338 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PNLIPP16233 465 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 JUNDP17535 347 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ATP6V1C1P21283 382 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 UQCRC2P22695 453 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FASP25445 335 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GRIA3P42263 894 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GPR3P46089 330 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DGKQP52824 942 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 NME5P56597 212 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 WNT3P56703 355 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 NXPH1P58417 271 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DDX39BQ13838 428 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 GNA13Q14344 377 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC9A5Q14940 896 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MUM1Q2TAK8 710 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PGS1Q32NB8 556 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM98BQ52LJ0 330 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PRAMEF8Q5VWM4 474 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PRAMEF7Q5VXH5 474 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MRM1Q6IN84 353 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ARMC6Q6NXE6 501 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 RNF44Q7L0R7 432 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TAF8Q7Z7C8 310 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ANKRD53Q8N9V6 530 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF548Q8NEK5 533 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FLVCR1-AS1Q8TAF5 88 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DNAJB14Q8TBM8 379 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DNAJC9Q8WXX5 260 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TSACCQ96A04 125 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 FAM120BQ96EK7 910 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 RDH12Q96NR8 316 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 PRAP1Q96NZ9 151 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 IL17FQ96PD4 163 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 OR2A14Q96R47 310 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DPH2Q9BQC3 489 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 DPH7Q9BTV6 452 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 ZNF717Q9BY31 904 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TMEM38AQ9H6F2 299 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 LYRM4Q9HD34 91 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 MIEF1Q9NQG6 463 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 AASDHPPTQ9NRN7 309 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 TAS2R9Q9NYW1 312 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 VAPAQ9P0L0 249 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 APOBEC3BQ9UH17 382 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 RAB26Q9ULW5 256 aa6.53□□□□□ -1.36
ECHDC1-210ENST00000454859 CACNA1IQ9P0X4 2223 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 MDC1Q14676 2089 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 TMEM131Q92545 1883 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ISM1B1AKI9 464 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 K7ESF4 209 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 CLIC1O00299 241 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GSTA4O15217 222 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ETHE1O95571 254 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 TGFB1P01137 390 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SMIM10L1P0DMW3 83 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 RAP2AP10114 183 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GNSP15586 552 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 TACR1P25103 407 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GZMMP51124 257 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ZXDAP98168 799 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SIGLEC14Q08ET2 396 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 C2orf80Q0P641 193 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 NR1D2Q14995 579 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SUZ12Q15022 739 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 CEBPEQ15744 281 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GARNL3Q5VVW2 1013 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GLYATQ6IB77 296 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ABHD17CQ6PCB6 329 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SPESP1Q6UW49 350 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 LAYNQ6UX15 382 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 MED25Q71SY5 747 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ABHD13Q7L211 337 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ERMP1Q7Z2K6 904 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ASPGQ86U10 573 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 KRTCAP2Q8N6L1 136 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 OR52N2Q8NGI0 321 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 BAHD1Q8TBE0 780 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 TM4SF18Q96CE8 201 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 MS4A6EQ96DS6 147 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 CENPNQ96H22 339 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SMIM10Q96HG1 83 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SERINC2Q96SA4 455 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 HBEGFQ99075 208 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 BDH2Q9BUT1 245 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms