RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FAM120CQ9NX05 1096 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SELENONQ9NZV5 590 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TMCC3Q9ULS5 477 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PI15O43692 258 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 MOSPD3O75425 235 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 NAT1P18440 290 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 FEN1P39748 380 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TRPC1P48995 793 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ST13P50502 369 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RPP38P78345 283 aaKnown RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TAP2Q03519 686 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 EPS8Q12929 822 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 MED22Q15528 200 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SLC5A12Q1EHB4 618 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 EGFLAMQ63HQ2 1017 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 TANGO2Q6ICL3 276 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RRM2BQ7LG56 351 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RIMKLAQ8IXN7 391 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 LGI4Q8N135 537 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 RAB42Q8N4Z0 105 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 L3MBTL4Q8NA19 623 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-213ENST00000454468 SLC23A2Q9UGH3 650 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 CA5BQ9Y2D0 317 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 PLEKHM1Q9Y4G2 1056 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
SMPD4-213ENST00000454468 EDDM13A0A1B0GTR0 161 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 LILRB3O75022 631 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ABCB7O75027 752 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 AP2A2O94973 939 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 NPPBP16860 134 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 SLC19A1P41440 591 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 RGNQ15493 299 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF385BQ569K4 471 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 OR10G2Q8NGC3 310 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 EFCAB11Q9BUY7 163 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 FUNDC2Q9BWH2 189 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 REEP4Q9H6H4 257 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 USE1Q9NZ43 259 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF229Q9UJW7 825 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 SPTBP11277 2137 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 MT-ND2P03891 347 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 PDGFRLQ15198 375 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 DPY19L1Q2PZI1 675 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 HNRNPA1L2Q32P51 320 aaKnown RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 SPIN4Q56A73 249 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 GRHL2Q6ISB3 625 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 PRR23BQ6ZRT6 265 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 DPPA4Q7L190 304 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 SPARTQ8N0X7 666 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 COL21A1Q96P44 957 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 KCNK12Q9HB15 430 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 TRBC2A0A5B9 178 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 RGS5O15539 181 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 RGS10O43665 173 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 SLCO2B1O94956 709 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 APOL3O95236 402 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 KAT7O95251 611 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 LCKP06239 509 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 CRHBPP24387 322 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 GRK3P35626 688 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 PRLHRP49683 370 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 DAPP51397 102 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ADARB1P78563 741 aaKnown RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 DMPKQ09013 629 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 GPAT3Q53EU6 434 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 CPZQ66K79 652 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ERICH5Q6P6B1 374 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ZZZ3Q8IYH5 903 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 ZCCHC10Q8TBK6 192 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 C16orf78Q8WTQ4 265 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 RNF31Q96EP0 1072 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 DUS3LQ96G46 650 aaKnown RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 MRGPRX3Q96LB0 322 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 WDR26Q9H7D7 661 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 RC3H2Q9HBD1 1191 aaKnown RBP11.48□□□□□ -0.57
SMPD4-213ENST00000454468 FBXL12Q9NXK8 326 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 CLCA2Q9UQC9 943 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 AP3M1Q9Y2T2 418 aa11.48□□□□□ -0.57
SMPD4-213ENST00000454468 H0YAE9 185 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 FPR1P21462 350 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 MNX1P50219 401 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 CDK5R2Q13319 367 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TRIM16LQ309B1 348 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SLCO4C1Q6ZQN7 724 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 NCCRP1Q6ZVX7 275 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 PAGE2Q7Z2X7 111 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 LRRTM4Q86VH4 590 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SLC5A8Q8N695 610 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 UBTD2Q8WUN7 234 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms