RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CDKN2CP42773 168 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 FNTBP49356 437 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 SESN3P58005 492 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 RELAQ04206 551 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 OR4C11Q6IEV9 310 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 LCN8Q6JVE9 175 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 WDR5BQ86VZ2 330 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 PPCDCQ96CD2 204 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 MS4A6EQ96DS6 147 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 RSRC1Q96IZ7 334 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 ZNF583Q96ND8 569 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 AICDAQ9GZX7 198 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 IKZF5Q9H5V7 419 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 UCK1Q9HA47 277 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 EGFL7Q9UHF1 273 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 PCDHB3Q9Y5E6 796 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 TDRD6O60522 2096 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 TCRBV3S1A0A5B6 114 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 OR5K3A6NET4 321 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ARPC2O15144 300 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 BAG2O95816 211 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 GSNP06396 782 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 PLA2G16P53816 162 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 TRA2BP62995 288 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 MC1RQ01726 317 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 AASDHQ4L235 1098 aaPredicted RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 FBXO42Q6P3S6 717 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 FIGLAQ6QHK4 219 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 CYP2R1Q6VVX0 501 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 OOSP2Q86WS3 158 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ARL14Q8N4G2 192 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SRFBP1Q8NEF9 429 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 TM4SF18Q96CE8 201 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 KCNC2Q96PR1 638 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 C17orf62Q9BQA9 187 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 CPPED1Q9BRF8 314 aaPredicted RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 KLHL31Q9H511 634 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SNX13Q9Y5W8 968 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 CROCCQ5TZA2 2017 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 AQP12BA6NM10 295 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 DDCP20711 480 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ATP6V1B2P21281 511 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SSR2P43308 183 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 TSFMP43897 325 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 MAZP56270 477 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 KLC1Q07866 573 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SIM2Q14190 667 aaPredicted RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 HEPACAMQ14CZ8 416 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ZNF385BQ569K4 471 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 FCRL6Q6DN72 434 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 C17orf82Q86X59 251 aaPredicted RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 AQP12AQ8IXF9 295 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 CLECL1Q8IZS7 167 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 GOLM1Q8NBJ4 401 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 OR2L5Q8NG80 312 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 THAP11Q96EK4 314 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 TEFMQ96QE5 360 aaKnown RBP13.59□□□□□ -0.23
USP39-207ENST00000450066 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SLC6A16Q9GZN6 736 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ERVMER34-1Q9H9K5 563 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 MIEF1Q9NQG6 463 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 ERVK-11Q9UQG0 969 aa13.59□□□□□ -0.23
USP39-207ENST00000450066 SPAG17Q6Q759 2223 aa13.58□□□□□ -0.23
USP39-207ENST00000450066 BDP1A6H8Y1 2624 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 A0A0A6YYD5 115 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 A0A0J9YY10 115 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 PPM1DO15297 605 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 ERI3O43414 337 aaKnown RBP13.58□□□□□ -0.24
USP39-207ENST00000450066 TMPRSS11DO60235 418 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 NOBOXO60393 691 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 TBX19O60806 448 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 ZCCHC18P0CG32 403 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 OR4D2P58180 307 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 TEAD4Q15561 434 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 TOR1AIP1Q5JTV8 583 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 ABHD17CQ6PCB6 329 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 LRRC74BQ6ZQY2 392 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 VN1R4Q7Z5H5 301 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 C11orf74Q86VG3 221 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 ZNF761Q86XN6 746 aaPredicted RBP13.58□□□□□ -0.24
USP39-207ENST00000450066 PROSER1Q86XN7 944 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 OR2T12Q8NG77 320 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 BAHD1Q8TBE0 780 aaPredicted RBP13.58□□□□□ -0.24
USP39-207ENST00000450066 NT5CQ8TCD5 201 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 NRG4Q8WWG1 115 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
USP39-207ENST00000450066 OR2A5Q96R48 311 aa13.58□□□□□ -0.24
USP39-207ENST00000450066 TBCDQ9BTW9 1192 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms