RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 UBOX5O94941 541 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 TACR1P25103 407 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 ASMTP46597 345 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 CLDN8P56748 225 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 ZFP36L1Q07352 338 aaKnown RBP18.33■□□□□ 0.53
RPS28-202ENST00000449223 ZNF763Q0D2J5 394 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 PTGR1Q14914 329 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 RPS6KA2Q15349 733 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 TOR1AIP1Q5JTV8 583 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 STPG1Q5TH74 334 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 GLRX5Q86SX6 157 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 ZCCHC7Q8N3Z6 543 aaKnown RBP18.33■□□□□ 0.53
RPS28-202ENST00000449223 KCT2Q8NC54 265 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 GLB1L3Q8NCI6 653 aaPredicted RBP18.33■□□□□ 0.53
RPS28-202ENST00000449223 UTP15Q8TED0 518 aaKnown RBP18.33■□□□□ 0.53
RPS28-202ENST00000449223 TSPEARQ8WU66 669 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 TUBB6Q9BUF5 446 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 ROGDIQ9GZN7 287 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 PCDHGA1Q9Y5H4 931 aa18.33■□□□□ 0.53
RPS28-202ENST00000449223 A0A0A6YYD5 115 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 ERI3O43414 337 aaKnown RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 SLC22A3O75751 556 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 KLHL18O94889 574 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 ANXA4P09525 319 aaPredicted RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 HIST1H1TP22492 207 aaPredicted RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 ZFP36L2P47974 494 aaKnown RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 VSX2P58304 361 aaPredicted RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 TRA2BP62995 288 aaKnown RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 BNIP1Q12981 228 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 SPIDRQ14159 915 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 RCAN2Q14206 197 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 HKDC1Q2TB90 917 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 DEFB110Q30KQ9 67 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 WASHC2DQ5SRD0 308 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 TMTC4Q5T4D3 741 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 GARNL3Q5VVW2 1013 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 PAOXQ6QHF9 649 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 IKBIPQ70UQ0 350 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 ABHD13Q7L211 337 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 FUNDC1Q8IVP5 155 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 RIMKLAQ8IXN7 391 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 CMTM5Q96DZ9 223 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 TEX37Q96LM6 180 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 TEFMQ96QE5 360 aaKnown RBP18.33■□□□□ 0.52
RPS28-202ENST00000449223 MACROD1Q9BQ69 325 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 C17orf62Q9BQA9 187 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 PRM3Q9NNZ6 103 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 MAPRE3Q9UPY8 281 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 SPEGQ15772 3267 aa18.33■□□□□ 0.52
RPS28-202ENST00000449223 RTCAO00442 366 aaKnown RBP18.32■□□□□ 0.52
RPS28-202ENST00000449223 PRPS1L1P21108 318 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 ARL4DP49703 201 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 SEPHS1P49903 392 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 PLA2G16P53816 162 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 UFM1P61960 85 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 MAPRE2Q15555 327 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 MRM1Q6IN84 353 aaKnown RBP18.32■□□□□ 0.52
RPS28-202ENST00000449223 ZNF793Q6ZN11 406 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 OR9I1Q8NGQ6 314 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 RP9Q8TA86 221 aaKnown RBP18.32■□□□□ 0.52
RPS28-202ENST00000449223 TESCQ96BS2 214 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 CCDC74BQ96LY2 380 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 EBPLQ9BY08 206 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 MYNNQ9NPC7 610 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 SLC52A3Q9NQ40 469 aa18.32■□□□□ 0.52
RPS28-202ENST00000449223 RIF1Q5UIP0 2472 aaKnown RBP18.32■□□□□ 0.52
RPS28-202ENST00000449223 PCNX2A6NKB5 2137 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 ZFHX2Q9C0A1 2572 aaPredicted RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 A0A088AWK7 358 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 GNG14A0A1W2PPG7 69 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 DYTNA2CJ06 578 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 EEDO75530 441 aaKnown RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 STATHP02808 62 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 KLK1P06870 262 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 T-ENOLP0DO92 83 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 ALOX12P18054 663 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 ZNF10P21506 573 aaPredicted RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 ATP5A1P25705 553 aaKnown RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 SSR2P43308 183 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 GCGRP47871 477 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 PDX1P52945 283 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 CLNS1AP54105 237 aaKnown RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 E2F1Q01094 437 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 SNAP47Q5SQN1 464 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 BLOC1S3Q6QNY0 202 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 STARD8Q92502 1023 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 SORBS1Q9BX66 1292 aaKnown RBP18.31■□□□□ 0.52
RPS28-202ENST00000449223 DPY30Q9C005 99 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 CLMPQ9H6B4 373 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 ARL8BQ9NVJ2 186 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 CCDC167Q9P0B6 97 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 BAIAP2L1Q9UHR4 511 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 TAGLN3Q9UI15 199 aa18.31■□□□□ 0.52
RPS28-202ENST00000449223 FAM234BA2RU67 622 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 RFPL3O75679 317 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 EIF2S1P05198 315 aaKnown RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 ZNF888P0CJ79 500 aaPredicted RBP18.3■□□□□ 0.52
RPS28-202ENST00000449223 FOLR1P15328 257 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 CALB2P22676 271 aa18.3■□□□□ 0.52
RPS28-202ENST00000449223 IL12AP29459 219 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms