RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IGLV3-12A0A075B6K2 115 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 ANKDD1BA6NHY2 528 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 AGPSO00116 658 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 MAP2K7O14733 419 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 SMIM24O75264 130 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 CEACAM4O75871 244 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 HEXBP07686 556 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 COL6A2P12110 1019 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 EPB42P16452 691 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 ALOX12P18054 663 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 GSTM2P28161 218 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 XCR1P46094 333 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 SLCO1A2P46721 670 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 CCL11P51671 97 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 PGDP52209 483 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 STXBP1P61764 594 aaKnown RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 LAPTM5Q13571 262 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 DOC2AQ14183 400 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 NAA30Q147X3 362 aaPredicted RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 INPP5JQ15735 1006 aaPredicted RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 HIST2H2ACQ16777 129 aaPredicted RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 TUBB8Q3ZCM7 444 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 MINDY4Q4G0A6 757 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 HIST2H2AA3Q6FI13 130 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 ZC3H7AQ8IWR0 971 aaKnown RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 PTGR2Q8N8N7 351 aaPredicted RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 PITHD1Q9GZP4 211 aaPredicted RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 MRPL46Q9H2W6 279 aaKnown RBP13.78□□□□□ -0.2
USP39-206ENST00000448971 HS3ST3B1Q9Y662 390 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 ABCA12Q86UK0 2595 aa13.78□□□□□ -0.2
USP39-206ENST00000448971 WIPF3A6NGB9 483 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 A6NL46 340 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 IDSB3KWA1 339 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 GOLGA8RI6L899 631 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 SHBGP04278 402 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 ACPPP15309 386 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 EPORP19235 508 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 PIK3CGP48736 1102 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 RAB8AP61006 207 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 OLR1P78380 273 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 RAPSNQ13702 412 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 EIF2S3LQ2VIR3 472 aaKnown RBP13.77□□□□□ -0.21
USP39-206ENST00000448971 DCAF10Q5QP82 559 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 FAAH2Q6GMR7 532 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 PDSS2Q86YH6 399 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 Q8NA96 180 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 GAL3ST3Q96A11 431 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 NACC2Q96BF6 587 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 ACTR8Q9H981 624 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 PPCSQ9HAB8 311 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 TMCO1Q9UM00 188 aa13.77□□□□□ -0.21
USP39-206ENST00000448971 TNPO3Q9Y5L0 923 aaKnown RBP13.77□□□□□ -0.21
USP39-206ENST00000448971 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PCSK5Q92824 1860 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 LRRC14BA6NHZ5 514 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 SOCS6O14544 535 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 SNPHO15079 494 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 KLK8O60259 260 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 GALR3O60755 368 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 PRAMEF4O60810 478 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 ALOX12BO75342 701 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 B3GALT4O96024 378 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 SERPINA6P08185 405 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PCNAP12004 261 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 KRT15P19012 456 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 CD22P20273 847 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 HPDP32754 393 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 EMP2P54851 167 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 EEF1A2Q05639 463 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 GTF2H2Q13888 395 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 TBCCQ15814 346 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PRR30Q53SZ7 412 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 IRAK1BP1Q5VVH5 260 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PRAMEF9Q5VWM5 478 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 JMJD6Q6NYC1 403 aaPredicted RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 GTF2H2CQ6P1K8 395 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 GOLGA7Q7Z5G4 137 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 AFAP1L2Q8N4X5 818 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 OR5T3Q8NGG3 340 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 EPS8L3Q8TE67 593 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 UTP15Q8TED0 518 aaKnown RBP13.76□□□□□ -0.21
USP39-206ENST00000448971 CREB3L4Q8TEY5 395 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 WDR34Q96EX3 536 aa13.76□□□□□ -0.21
USP39-206ENST00000448971 PEX11GQ96HA9 241 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms