RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 NIPAL1Q6NVV3 410 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 NXPE4Q6UWF7 544 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 RPTNQ6XPR3 784 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 QSOX2Q6ZRP7 698 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 LGI4Q8N135 537 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 THAP3Q8WTV1 239 aaPredicted RBP26.51■■□□□ 1.83
CBX4-202ENST00000448310 CAPZA3Q96KX2 299 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 AIF1LQ9BQI0 150 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 TRIM51Q9BSJ1 452 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 SLC6A16Q9GZN6 736 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 CACNA1CQ13936 2221 aa26.51■■□□□ 1.83
CBX4-202ENST00000448310 A8MUA0 341 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 ZSCAN12O43309 604 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 SNRPB2P08579 225 aaKnown RBP26.5■■□□□ 1.83
CBX4-202ENST00000448310 ESRRAP11474 423 aaPredicted RBP26.5■■□□□ 1.83
CBX4-202ENST00000448310 MAPKAPK3Q16644 382 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 AICDAQ9GZX7 198 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 NECTIN3Q9NQS3 549 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 FBN2P35556 2912 aa26.5■■□□□ 1.83
CBX4-202ENST00000448310 SMIM10L1P0DMW3 83 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 ITGA8P53708 1063 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 KRTCAP3Q53RY4 240 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 TOR1AIP1Q5JTV8 583 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 SIAH3Q8IW03 269 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 HORMAD2Q8N7B1 307 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 TRPV3Q8NET8 790 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 SMIM10Q96HG1 83 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 EGFL8Q99944 293 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 ZFATQ9P243 1243 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 ZNF835Q9Y2P0 537 aa26.49■■□□□ 1.83
CBX4-202ENST00000448310 FAM95CA0A1B0GW59 222 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 SAGE2PA6NJ88 616 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 PSMD12O00232 456 aaPredicted RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 SLC25A12O75746 678 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 MLYCDO95822 493 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 RNH1P13489 461 aaKnown RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 TCP1P17987 556 aaKnown RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 HSF1Q00613 529 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 DR1Q01658 176 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 ZNF630Q2M218 657 aaPredicted RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 C18orf21Q32NC0 220 aaPredicted RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 ZC3HC1Q86WB0 502 aaKnown RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 SPPL2CQ8IUH8 684 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 CA13Q8N1Q1 262 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 FAM98AQ8NCA5 519 aaKnown RBP26.48■■□□□ 1.83
CBX4-202ENST00000448310 CREB3L4Q8TEY5 395 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 LRRC39Q96DD0 335 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 KCNE2Q9Y6J6 123 aa26.48■■□□□ 1.83
CBX4-202ENST00000448310 IGKV3D-11A0A0A0MRZ8 115 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 TCRBV16S1A1N1A0A5B0 115 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 URADA6NGE7 173 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 ARL4CP56559 192 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 MLF1P58340 268 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 TAS2R39P59534 338 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 MGAT5Q09328 741 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 FASTKD3Q14CZ7 662 aaKnown RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 RNFT1Q5M7Z0 435 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 Q6ZPB1 254 aaPredicted RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 NCCRP1Q6ZVX7 275 aaPredicted RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 ZNF227Q86WZ6 799 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 NKAPQ8N5F7 415 aaKnown RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 CPSF7Q8N684 471 aaKnown RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 NFAM1Q8NET5 270 aaPredicted RBP26.47■■□□□ 1.83
CBX4-202ENST00000448310 ADAMTS18Q8TE60 1221 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 ANKRD49Q8WVL7 239 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 TRIM31Q9BZY9 425 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 RUBCNLQ9H714 662 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 PRDM9Q9NQV7 894 aa26.47■■□□□ 1.83
CBX4-202ENST00000448310 A0A0G2JN53 185 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 ASNA1O43681 348 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 NME2P1O60361 137 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 NME2P22392 152 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 GDF5P43026 501 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 CDSNQ15517 529 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 XKRXQ6PP77 449 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 SYDE1Q6ZW31 735 aaPredicted RBP26.46■■□□□ 1.83
CBX4-202ENST00000448310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.46■■□□□ 1.839e-6■■□□□ 11.8
CBX4-202ENST00000448310 KCNF1Q9H3M0 494 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 CHST11Q9NPF2 352 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 OARD1Q9Y530 152 aa26.46■■□□□ 1.83
CBX4-202ENST00000448310 WDR47O94967 919 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 SERPINA6P08185 405 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 CYB561P49447 251 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 BTN3A2P78410 334 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 PDIA2Q13087 525 aaKnown RBP26.45■■□□□ 1.82
CBX4-202ENST00000448310 FRG1Q14331 258 aaKnown RBP26.45■■□□□ 1.82
CBX4-202ENST00000448310 TSNQ15631 228 aaKnown RBP26.45■■□□□ 1.82
CBX4-202ENST00000448310 CEP97Q8IW35 865 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 FBXO36Q8NEA4 188 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 DEFB126Q9BYW3 111 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 CLK4Q9HAZ1 481 aaKnown RBP26.45■■□□□ 1.82
CBX4-202ENST00000448310 MEMO1Q9Y316 297 aa26.45■■□□□ 1.82
CBX4-202ENST00000448310 TP73O15350 636 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 PIAS1O75925 651 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 SEC31AO94979 1220 aaKnown RBP26.44■■□□□ 1.82
CBX4-202ENST00000448310 ABOP16442 354 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 ZNF24P17028 368 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 CDKL1Q00532 357 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 FRA10AC1Q70Z53 315 aa26.44■■□□□ 1.82
CBX4-202ENST00000448310 CREG2Q8IUH2 290 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms