RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MIPP30301 263 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 CAV2P51636 162 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SLC36A3Q495N2 470 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 REC114Q7Z4M0 266 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR10G2Q8NGC3 310 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OR1S1Q8NH92 325 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FAM84AQ96KN4 292 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 EVLQ9UI08 416 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PLLPQ9Y342 182 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 NPIPA2E9PIF3 369 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 NPIPA3F8WFD2 350 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 FANCGO15287 622 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PI15O43692 258 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TPST2O60704 377 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ALDOBP05062 364 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 JUPP14923 745 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 OC90Q02509 493 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 KLF10Q13118 480 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 GK3PQ14409 553 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF791Q3KP31 576 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 IFI44Q8TCB0 444 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 TFGQ92734 400 aaPredicted RBP8.68□□□□□ -1.02
NIPBL-202ENST00000448238 DHDHQ9UQ10 334 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 UGT2A1Q9Y4X1 527 aa8.68□□□□□ -1.02
NIPBL-202ENST00000448238 PRR5-ARHGAP8B1AHC4 643 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 RFPL2O75678 378 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 NUDT17P0C025 328 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ARHGAP8P85298 464 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 MMAAQ8IVH4 418 aaKnown RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ZNF781Q8N8C0 355 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 C15orf54Q8N8G6 183 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 FAM83FQ8NEG4 500 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ACDQ96AP0 544 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ELMOD3Q96FG2 381 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ADAM29Q9UKF5 820 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 FANCAO15360 1455 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ARVCFO00192 962 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 NMT2O60551 498 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 HDCP19113 662 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 CPT2P23786 658 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 TRAPPC6BQ86SZ2 158 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 TMEM234Q8WY98 164 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 HDAC10Q969S8 669 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 MTMR8Q96EF0 704 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 DGAT2Q96PD7 388 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 TBX5Q99593 518 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PCDHB14Q9Y5E9 798 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 A8MX80 341 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 KRBOX1C9JBD0 128 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PDHXO00330 501 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 TOXO94900 526 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 RETP07949 1114 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 GALK2Q01415 458 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ALYREFQ86V81 257 aaKnown RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 AQP12AQ8IXF9 295 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 DRAXINQ8NBI3 349 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 HAVCR2Q8TDQ0 301 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 BARD1Q99728 777 aaKnown RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 SEMA3CQ99985 751 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 POT1Q9NUX5 634 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 C19orf25Q9UFG5 118 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 LOC100130705A0A1B0GUX0 176 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 UBBP0CG47 229 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 UBCP0CG48 685 aaKnown RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 RPIAP49247 311 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 FSTL1Q12841 308 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 RSU1Q15404 277 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OR52E4Q8NGH9 312 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 ZFAND2BQ8WV99 257 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PMEPA1Q969W9 287 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 SLC25A36Q96CQ1 311 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PAPOLGQ9BWT3 736 aaKnown RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 SLC19A3Q9BZV2 496 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PAQR5Q9NXK6 330 aaPredicted RBP8.67□□□□□ -1.02
NIPBL-202ENST00000448238 POMPQ9Y244 141 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 SYNGR4O95473 234 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 MYLK3Q32MK0 819 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 CLEC12AQ5QGZ9 265 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 CYB5R4Q7L1T6 521 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 SERPINA12Q8IW75 414 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OR52B2Q96RD2 323 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 TTPALQ9BTX7 342 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 CERS4Q9HA82 394 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 MAN2C1Q9NTJ4 1040 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PPP1R2P9O14990 202 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 NDUFA6P56556 154 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 UBE2UQ5VVX9 321 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 PAOXQ6QHF9 649 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 OR1M1Q8NGA1 313 aa8.67□□□□□ -1.02
NIPBL-202ENST00000448238 C16orf78Q8WTQ4 265 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms