RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 INHBAP08476 426 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 RHOXF2BP0C7M4 288 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 MTHFD2P13995 350 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 IL10P22301 178 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 SERPINB8P50452 374 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 SKP1P63208 163 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 IRF8Q02556 426 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 ABRAXAS2Q15018 415 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 NSDHLQ15738 373 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 B3GNTL1Q67FW5 361 aaPredicted RBP13.9□□□□□ -0.18
USE1-202ENST00000445667 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 VN1R5Q7Z5H4 357 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 ATCAYQ86WG3 371 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 PLD6Q8N2A8 252 aaKnown RBP13.9□□□□□ -0.18
USE1-202ENST00000445667 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 TTLQ8NG68 377 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 TBC1D20Q96BZ9 403 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 SNRNP40Q96DI7 357 aaKnown RBP13.9□□□□□ -0.18
USE1-202ENST00000445667 CNDP1Q96KN2 507 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 LMF1Q96S06 567 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 WDR77Q9BQA1 342 aaPredicted RBP13.9□□□□□ -0.18
USE1-202ENST00000445667 RHOXF2Q9BQY4 288 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 EPS8L2Q9H6S3 715 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 ZNF358Q9NW07 568 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 PLA2G3Q9NZ20 509 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 C19orf25Q9UFG5 118 aaPredicted RBP13.9□□□□□ -0.18
USE1-202ENST00000445667 VPS4AQ9UN37 437 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 DOCK10Q96BY6 2186 aa13.9□□□□□ -0.18
USE1-202ENST00000445667 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 SYCE1LA8MT33 242 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 K7EPI3 171 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 ERI3O43414 337 aaKnown RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 CLEC3AO75596 197 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 TBX6O95947 436 aaPredicted RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 UQCRHP07919 91 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 CYC1P08574 325 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 ICAM2P13598 275 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 MSH2P43246 934 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 UQCRFS1P47985 274 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 STXBP1P61764 594 aaKnown RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 BTG2P78543 158 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 ACTN3Q08043 901 aaPredicted RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 MFAP5Q13361 173 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 ACAP2Q15057 778 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 BTBD16Q32M84 506 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 SFT2D3Q587I9 215 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 CRB2Q5IJ48 1285 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 RIPOR1Q6ZS17 1223 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 LRRC70Q7Z2Q7 622 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 CCDC91Q7Z6B0 441 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 IQCKQ8N0W5 287 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 LRRN4CLQ8ND94 238 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 RHEBL1Q8TAI7 183 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 PPP4R1Q8TF05 950 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 GAL3ST3Q96A11 431 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 MS4A6EQ96DS6 147 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 WDR34Q96EX3 536 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 FAR2Q96K12 515 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 PTCHD1Q96NR3 888 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 GPR78Q96P69 363 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 EFCAB11Q9BUY7 163 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 PITHD1Q9GZP4 211 aaPredicted RBP13.89□□□□□ -0.19
USE1-202ENST00000445667 OPTCQ9UBM4 332 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 IKBKGQ9Y6K9 419 aa13.89□□□□□ -0.19
USE1-202ENST00000445667 A0A087WUV0 522 aaPredicted RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 MAGEB17A8MXT2 336 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 F10P00742 488 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 RNH1P13489 461 aaKnown RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 GFAPP14136 432 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 GNLYP22749 145 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 JAK1P23458 1154 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 SOX11P35716 441 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 SERPINB9P50453 376 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 PLA2G16P53816 162 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 OR4D2P58180 307 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 LAPTM5Q13571 262 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 RUNX2Q13950 521 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 HIST2H2ACQ16777 129 aaPredicted RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 HIST2H2AA3Q6FI13 130 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 PAPD4Q6PIY7 484 aaKnown RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 IFT20Q8IY31 132 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 CA13Q8N1Q1 262 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 TEX9Q8N6V9 391 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 UBTD2Q8WUN7 234 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 CLK4Q9HAZ1 481 aaKnown RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 ASF1BQ9NVP2 202 aa13.88□□□□□ -0.19
USE1-202ENST00000445667 CPSF2Q9P2I0 782 aaKnown RBP13.88□□□□□ -0.19
USE1-202ENST00000445667 A8MUI8 341 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 PSMD12O00232 456 aaPredicted RBP13.87□□□□□ -0.19
USE1-202ENST00000445667 PRMT3O60678 531 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 SH3BGRLO75368 114 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 EPB42P16452 691 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 GSTM2P28161 218 aa13.87□□□□□ -0.19
USE1-202ENST00000445667 CASP2P42575 452 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms