RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 KLHL31Q9H511 634 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 CLK4Q9HAZ1 481 aaKnown RBP18.91■□□□□ 0.62
LRCH3-208ENST00000443727 KCNK13Q9HB14 408 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 GPRC5BQ9NZH0 403 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 TAPBPO15533 448 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 PRMT3O60678 531 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 DNAJB6O75190 326 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 SEMA7AO75326 666 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 WDPCPO95876 746 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 MYBL2P10244 700 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 RNH1P13489 461 aaKnown RBP18.9■□□□□ 0.62
LRCH3-208ENST00000443727 GGT5P36269 586 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 TNFSF10P50591 281 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 EFTUD2Q15029 972 aaKnown RBP eCLIP18.9■□□□□ 0.62
LRCH3-208ENST00000443727 PDK4Q16654 411 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 XKR6Q5GH73 641 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 PAPD4Q6PIY7 484 aaKnown RBP18.9■□□□□ 0.62
LRCH3-208ENST00000443727 CYP4X1Q8N118 509 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 AMER2Q8N7J2 671 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 STAG3L4Q8TBR4 150 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 CREB3L4Q8TEY5 395 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 ESAMQ96AP7 390 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 UBXN10Q96LJ8 280 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 PTCHD1Q96NR3 888 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 TMEM79Q9BSE2 394 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 ALG9Q9H6U8 611 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 NMRAL1Q9HBL8 299 aa18.9■□□□□ 0.62
LRCH3-208ENST00000443727 ANKDD1BA6NHY2 528 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 CCNT2O60583 730 aaKnown RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 TFEBP19484 476 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 GSTM2P28161 218 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 HPDP32754 393 aaPredicted RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 PHBP35232 272 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 BTN3A2P78410 334 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 HYAL2Q12891 473 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 UAP1Q16222 522 aaPredicted RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 CEP128Q6ZU80 1094 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 SSC4DQ8WTU2 575 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 ZNF354BQ96LW1 612 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 BARD1Q99728 777 aaKnown RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 PITHD1Q9GZP4 211 aaPredicted RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 ABI3Q9P2A4 366 aa18.89■□□□□ 0.61
LRCH3-208ENST00000443727 MTRF1LQ9UGC7 380 aaKnown RBP18.89■□□□□ 0.61
LRCH3-208ENST00000443727 A0A088AWK7 358 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 SUPT3HB4E1H0 165 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 SUPT3HO75486 399 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 LTA4HP09960 611 aaKnown RBP18.88■□□□□ 0.61
LRCH3-208ENST00000443727 SLC35E2BP0CK96 405 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 ZNF10P21506 573 aaPredicted RBP18.88■□□□□ 0.61
LRCH3-208ENST00000443727 GMPRP36959 345 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 FCRLBQ6BAA4 426 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 BCORP1Q8N888 145 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 PDPRQ8NCN5 879 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 ARMC2Q8NEN0 867 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 M1APQ8TC57 530 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 FAR1Q8WVX9 515 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 GAL3ST3Q96A11 431 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 SEC16BQ96JE7 1060 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 RNF32Q9H0A6 362 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 EHD1Q9H4M9 534 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 NT5DC2Q9H857 520 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 ZDHHC18Q9NUE0 388 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 NUDT4Q9NZJ9 180 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 PTBP2Q9UKA9 531 aaKnown RBP18.88■□□□□ 0.61
LRCH3-208ENST00000443727 ACOT9Q9Y305 439 aa18.88■□□□□ 0.61
LRCH3-208ENST00000443727 USP9YO00507 2555 aaPredicted RBP18.88■□□□□ 0.61
LRCH3-208ENST00000443727 A0A0G2JN53 185 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 OR5H15A6NDH6 313 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 ERI3O43414 337 aaKnown RBP18.87■□□□□ 0.61
LRCH3-208ENST00000443727 SMIM10L1P0DMW3 83 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 GP1BBP13224 206 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 TAS2R50P59544 299 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 HIST2H2ACQ16777 129 aaPredicted RBP18.87■□□□□ 0.61
LRCH3-208ENST00000443727 PAGE2BQ5JRK9 111 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 ACER2Q5QJU3 275 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 MROH9Q5TGP6 573 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 HIST2H2AA3Q6FI13 130 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 RPUSD3Q6P087 351 aaKnown RBP18.87■□□□□ 0.61
LRCH3-208ENST00000443727 ST6GALNAC3Q8NDV1 305 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 PTCD3Q96EY7 689 aaKnown RBP18.87■□□□□ 0.61
LRCH3-208ENST00000443727 SMIM10Q96HG1 83 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 PSMG3-AS1Q96PY0 264 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 EFCAB11Q9BUY7 163 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 CD244Q9BZW8 370 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 MMP25Q9NPA2 562 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 OLAHQ9NV23 265 aa18.87■□□□□ 0.61
LRCH3-208ENST00000443727 LRIT2A6NDA9 550 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 FAM227AF5H4B4 570 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 CLEC3AO75596 197 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 MAOAP21397 527 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 HNRNPH1P31943 449 aaKnown RBP18.86■□□□□ 0.61
LRCH3-208ENST00000443727 PLA2G16P53816 162 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 BTG2P78543 158 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 IRF8Q02556 426 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 TGM3Q08188 693 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 LAPTM5Q13571 262 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 BMPR2Q13873 1038 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 DOC2AQ14183 400 aa18.86■□□□□ 0.61
LRCH3-208ENST00000443727 QSOX2Q6ZRP7 698 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms