RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 CNPPD1Q9BV87 410 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 TMEM184CQ9NVA4 438 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
LINC00642-202ENST00000442515 ALKBH4Q9NXW9 302 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 DRG1Q9Y295 367 aaKnown RBP12.95□□□□□ -0.34
LINC00642-202ENST00000442515 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 TCRBV16S1A1N1A0A5B0 115 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 A8MUA0 341 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 A8MVJ9 347 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 DVL2O14641 736 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 GALR3O60755 368 aaPredicted RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 SYF2O95926 243 aaKnown RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 CELA3AP09093 270 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 SLC35G6P0C7Q6 338 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 MAOAP21397 527 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 FMO4P31512 558 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 CTNNA1P35221 906 aaKnown RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 MEF2AQ02078 507 aaPredicted RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 HYAL2Q12891 473 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 HERC3Q15034 1050 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 POU4F3Q15319 338 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 WLSQ5T9L3 541 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 C16orf47Q6ZP98 133 aaPredicted RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 GK5Q6ZS86 529 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 SEM1Q6ZVN7 128 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 SLC13A5Q86YT5 568 aaPredicted RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 P3H2Q8IVL5 708 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 MPP5Q8N3R9 675 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 NAXEQ8NCW5 288 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 ZNF740Q8NDX6 193 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 SARAFQ96BY9 339 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 LRRC46Q96FV0 321 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 Q96MF0 132 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 HPF1Q9NWY4 346 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 GALPQ9UBC7 116 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 ZNF223Q9UK11 482 aaPredicted RBP12.94□□□□□ -0.34
LINC00642-202ENST00000442515 PCDHA3Q9Y5H8 950 aa12.94□□□□□ -0.34
LINC00642-202ENST00000442515 A0A1W2PPR1 153 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 ERI2A8K979 691 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 CHST10O43529 356 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 MYO1DO94832 1006 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 TJP3O95049 919 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 B3GALT4O96024 378 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 GABRA1P14867 456 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 ENDOUP21128 410 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 HRH2P25021 359 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 IMPA1P29218 277 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 MAN2A2P49641 1150 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 TPM4P67936 248 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 HSPB2Q16082 182 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 DEFB134Q4QY38 66 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 CAPN13Q6MZZ7 669 aaPredicted RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 REXO1L1PQ8IX06 675 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 GPALPP1Q8IXQ4 340 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 LINC01560Q8TB33 94 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 SPRR3Q9UBC9 169 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 MTRF1LQ9UGC7 380 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 TRPS1Q9UHF7 1281 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 SH2B3Q9UQQ2 575 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 YARS2Q9Y2Z4 477 aaKnown RBP12.93□□□□□ -0.34
LINC00642-202ENST00000442515 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
LINC00642-202ENST00000442515 ATP6AP2A0A1C7CYW4 349 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 NDUFS4O43181 175 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 PRKNO60260 465 aaPredicted RBP12.92□□□□□ -0.34
LINC00642-202ENST00000442515 SUSD5O60279 629 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 LCMT2O60294 686 aaKnown RBP12.92□□□□□ -0.34
LINC00642-202ENST00000442515 ATP6AP2O75787 350 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 OR2J2O76002 312 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 OR6B1O95007 311 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 HRGP04196 525 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 CHRM3P20309 590 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 TBPL1P62380 186 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 IL20RBQ6UXL0 311 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 FBXO15Q8NCQ5 510 aaPredicted RBP12.92□□□□□ -0.34
LINC00642-202ENST00000442515 ASB15Q8WXK1 588 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 YIPF4Q9BSR8 244 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 FAM129AQ9BZQ8 928 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 LDAHQ9H6V9 325 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 IL1RL2Q9HB29 575 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 CCDC177Q9NQR7 707 aaPredicted RBP12.92□□□□□ -0.34
LINC00642-202ENST00000442515 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 PRDM9Q9NQV7 894 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 CHRAC1Q9NRG0 131 aa12.92□□□□□ -0.34
LINC00642-202ENST00000442515 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
LINC00642-202ENST00000442515 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms