RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 KCTD4Q8WVF5 259 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TM9SF4Q92544 642 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GLYATL1Q969I3 302 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ULK4Q96C45 1275 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 NXNL1Q96CM4 212 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ARSGQ96EG1 525 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 COX14Q96I36 57 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 APOPT1Q96IL0 206 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPR78Q96P69 363 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 VPS35Q96QK1 796 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 COPS8Q99627 209 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPR21Q99679 349 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 SELENOSQ9BQE4 189 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ZSCAN5AQ9BUG6 496 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 LGR4Q9BXB1 951 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GPR87Q9BY21 358 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 ACTL8Q9H568 366 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 OGFRQ9NZT2 677 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 TMEM216Q9P0N5 145 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PDP2Q9P2J9 529 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 KLQ9UEF7 1012 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 PADI1Q9ULC6 663 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 GRID1Q9ULK0 1009 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 EDARQ9UNE0 448 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 VWA7Q9Y334 891 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 EMC9Q9Y3B6 208 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 DGKBQ9Y6T7 804 aa4.59□□□□□ -1.67
PTPN4-206ENST00000441089 CCDC88CQ9P219 2028 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 IGHV1OR21-1A0A087WYE8 117 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM202A6NGA9 273 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 OR2AG2A6NM03 316 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 TARM1B6A8C7 271 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 COPEO14579 308 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 PLIN3O60664 434 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 IPO13O94829 963 aaKnown RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 SLC25A14O95258 325 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ASMTLO95671 621 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 HEXAP06865 529 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 DHRS4L1P0CG22 281 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ATP1B2P14415 290 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CD1DP15813 335 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CHN1P15882 459 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 STMN1P16949 149 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF37AP17032 561 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF7P17097 686 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF8P17098 575 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CD9P21926 228 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 KELP23276 732 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CRABP2P29373 138 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ADSLP30566 484 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 DNAJA1P31689 397 aaKnown RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 AKT1P31749 480 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CCR7P32248 378 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 TRIM23P36406 574 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 NSG1P42857 185 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 GLRBP48167 497 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 POLD2P49005 469 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 PPM1FP49593 454 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 MEOX1P50221 254 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 IST1P53990 364 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 RAB10P61026 200 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 RPS15P62841 145 aaKnown RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 PRR5P85299 388 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CDK3Q00526 305 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CSHL1Q14406 222 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 GBX1Q14549 363 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 NFATC4Q14934 902 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 SLC9A5Q14940 896 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 BCL7AQ4VC05 210 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ACSBG2Q5FVE4 666 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CRB2Q5IJ48 1285 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 DCAF10Q5QP82 559 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 LDLRAP1Q5SW96 308 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 VWA5B1Q5TIE3 1220 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CES4AQ5XG92 561 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM198Q66K66 360 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 TTC19Q6DKK2 380 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 FCRL6Q6DN72 434 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 PTRHD1Q6GMV3 140 aaKnown RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 DOK6Q6PKX4 331 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ENPP7Q6UWV6 458 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 IGFL3Q6UXB1 125 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CYHR1Q6ZMK1 362 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 Q71RC1 249 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 MED25Q71SY5 747 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ARHGAP22Q7Z5H3 698 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 C11orf96Q7Z7L8 435 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 C17orf82Q86X59 251 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF761Q86XN6 746 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 PHYKPLQ8IUZ5 450 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 VRK3Q8IV63 474 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF547Q8IVP9 402 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 CPNE9Q8IYJ1 553 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
PTPN4-206ENST00000441089 BVESQ8NE79 360 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 FDCSPQ8NFU4 85 aa4.58□□□□□ -1.68
PTPN4-206ENST00000441089 GABPB2Q8TAK5 448 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms