RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 NMRK1Q9NWW6 199 aa13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 STOML1Q9UBI4 398 aa13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SUCOQ9UBS9 1254 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PACSIN3Q9UKS6 424 aa13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 LOXL2Q9Y4K0 774 aa13.92□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CCDC187A0A096LP49 1063 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 NPIPB8E9PQR5 432 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ETV5P41161 510 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SLC7A2P52569 658 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 GABREP78334 506 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 FLOT2Q14254 428 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CLPPQ16740 277 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 NXPE4Q6UWF7 544 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SUSD1Q6UWL2 747 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 DHDDSQ86SQ9 333 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 C17orf64Q86WR6 236 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 OOSP2Q86WS3 158 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 KRT78Q8N1N4 520 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 C2orf73Q8N5S3 287 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PROKR1Q8TCW9 393 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SMPDL3AQ92484 453 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 VPS33AQ96AX1 596 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 WDR34Q96EX3 536 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 LIN37Q96GY3 246 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SLC45A3Q96JT2 553 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 TEX37Q96LM6 180 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 STRADBQ9C0K7 418 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 HRASLS2Q9NWW9 162 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PDP2Q9P2J9 529 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 NKX1-2Q9UD57 310 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 RUVBL1Q9Y265 456 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 L3MBTL1Q9Y468 752 aa13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PIPSLA2A3N6 862 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 GSAPA4D1B5 854 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SORBS2O94875 1100 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 C9P02748 559 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ERGP11308 486 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 BCKDHAP12694 445 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CCL4P13236 92 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 NPPBP16860 134 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ITIH1P19827 911 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 IL12AP29459 219 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PEBP1P30086 187 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PKLRP30613 574 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SEPHS1P49903 392 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SESN3P58005 492 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SLC34A1Q06495 639 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CEACAM7Q14002 265 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 CCNIQ14094 377 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PTGR1Q14914 329 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 C8orf82Q6P1X6 216 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 RAB11FIP2Q7L804 512 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 TRIM73Q86UV7 250 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 AMIGO1Q86WK6 493 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PLXDC1Q8IUK5 500 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 LRRC56Q8IYG6 542 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ADGRF3Q8IZF5 1079 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 RNF148Q8N7C7 305 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PMEPA1Q969W9 287 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 LRRC58Q96CX6 371 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 APIPQ96GX9 242 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 METTL2AQ96IZ6 378 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 RSRC1Q96IZ7 334 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 MTERF1Q99551 399 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 TRIM15Q9C019 465 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PELI2Q9HAT8 420 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 SPHK1Q9NYA1 384 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 TMEM181Q9P2C4 612 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 STX18Q9P2W9 335 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 PISDQ9UG56 409 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 ACACAQ13085 2346 aa13.9□□□□□ -0.18
TNFRSF1A-204ENST00000440083 BRINP1O60477 761 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SNRNP200O75643 2136 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NPPAP01160 153 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 IL6P05231 212 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CDH1P12830 882 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SDC1P18827 310 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CXCR2P25025 360 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZFP36L2P47974 494 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LSSP48449 732 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ERFP50548 548 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CLDN8P56748 225 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FOXK2Q01167 660 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 E2F2Q14209 437 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CAPRIN1Q14444 709 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPATS1Q496A3 300 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPIN4Q56A73 249 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CATSPEREQ5SY80 951 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ARMC6Q6NXE6 501 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms