RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ELOAQ14241 798 aaKnown RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 UGT8Q16880 541 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 TATDN3Q17R31 274 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ZFP41Q8N8Y5 198 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 POF1BQ8WVV4 589 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 FBXO32Q969P5 355 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 CPPED1Q9BRF8 314 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 RNF121Q9H920 327 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MCUBQ9NWR8 336 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PCOLCE2Q9UKZ9 415 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 RAB23Q9ULC3 237 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 FZD4Q9ULV1 537 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 LTBP1Q14766 1721 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 HHLA1C9JL84 531 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 TPST2O60704 377 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 GPR32O75388 356 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 FGF18O76093 207 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 ACPPP15309 386 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 SMPD1P17405 629 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 KELP23276 732 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 NRIP1P48552 1158 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 BTN1A1Q13410 526 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 PPIGQ13427 754 aaKnown RBP eCLIP11.27□□□□□ -0.62e-7■■■□□ 15.7
SMPD4-209ENST00000439886 GPR50Q13585 617 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 TBCEQ15813 527 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-209ENST00000439886 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 CFAP77Q6ZQR2 320 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 ABI3BPQ7Z7G0 1075 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 GHDCQ8N2G8 530 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 TMEM86AQ8N2M4 240 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 OR10T2Q8NGX3 314 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 TRIM62Q9BVG3 475 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 ADGRE3Q9BY15 652 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 PPIL3Q9H2H8 161 aaKnown RBP11.27□□□□□ -0.6
SMPD4-209ENST00000439886 VPS9D1Q9Y2B5 631 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 SLC9A8Q9Y2E8 581 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 MED16Q9Y2X0 877 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 RAI2Q9Y5P3 530 aa11.27□□□□□ -0.6
SMPD4-209ENST00000439886 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 STK16O75716 305 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 PDE9AO76083 593 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 GBAP04062 536 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 MMP3P08254 477 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 RFX2P48378 723 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 MAN2A2P49641 1150 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 SNAPC1Q16533 368 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CTSL3PQ5NE16 218 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 SCD5Q86SK9 330 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 TRIM69Q86WT6 500 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 SLC37A3Q8NCC5 494 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 APIPQ96GX9 242 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 GLTPQ9NZD2 209 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CLEC4AQ9UMR7 237 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CMAHPQ9Y471 501 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 HSPE1-MOB4S4R3N1 261 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 LOC102723532A0A0G2JNH3 316 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 A0A1B0GVC2 190 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 A6NIN4 97 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CCNB2O95067 398 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CYP17A1P05093 508 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CYP2A6P11509 494 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-209ENST00000439886 KCNE1P15382 129 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 TNNI3P19429 210 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 RPL9P32969 192 aaKnown RBP11.27□□□□□ -0.61
SMPD4-209ENST00000439886 BOP1Q14137 746 aaKnown RBP11.27□□□□□ -0.61
SMPD4-209ENST00000439886 MFSD10Q14728 455 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 POU4F3Q15319 338 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 IQCCQ4KMZ1 466 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 FAM180BQ6P0A1 224 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 ATAD1Q8NBU5 361 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 ATP6V1C2Q8NEY4 427 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 OR5AK3PQ8NH89 298 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 CCDC32Q9BV29 185 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 BEX1Q9HBH7 125 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 TMEM184CQ9NVA4 438 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 OSER1Q9NX31 292 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
SMPD4-209ENST00000439886 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 PIPSLA2A3N6 862 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 WNT9AO14904 365 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 CLDN9O95484 217 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 BMP1P13497 986 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 APEX1P27695 318 aaKnown RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 ERVK-21P61565 698 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 RPS24P62847 133 aaKnown RBP11.26□□□□□ -0.61
SMPD4-209ENST00000439886 PCDH1Q08174 1060 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 LEXMQ3ZCV2 418 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
SMPD4-209ENST00000439886 RAB41Q5JT25 222 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms